MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:48389987-48810000

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
5730480H06Rik	5	48395573 to 48414294	18721	+	protein coding gene	RIKEN cDNA 5730480H06 gene
Tssr46159	5	48401017 to 48401024	7	+	TSS region	transcription start site region 46159
Hplq1	5	48413116 to 48413116	0		QTL	hot plate latency 1
Gm43831	5	48535344 to 48537941	2597	-	unclassified gene	predicted gene 43831
Gm20700	5	48590889 to 48599994	9105	+	antisense lncRNA gene	predicted gene 20700
Tssr50921	5	48599987 to 48600000	13	-	TSS region	transcription start site region 50921
Gm43648	5	48624669 to 48627153	2484	-	unclassified gene	predicted gene 43648
Gm19031	5	48665905 to 48667269	1364	+	pseudogene	predicted gene, 19031
Tssr46160	5	48676430 to 48676436	6	+	TSS region	transcription start site region 46160
Gm43829	5	48712090 to 48715891	3801	-	unclassified gene	predicted gene 43829
Tssr50922	5	48749335 to 48749351	16	-	TSS region	transcription start site region 50922
Tssr50923	5	48754521 to 48754536	15	-	TSS region	transcription start site region 50923
Tssr1478	5	48766431 to 48766432	1	-	TSS region	transcription start site region 1478
Tssr50924	5	48781025 to 48781061	36	-	TSS region	transcription start site region 50924
Tssr50925	5	48781199 to 48781210	11	-	TSS region	transcription start site region 50925
Tssr50926	5	48786924 to 48786925	1	-	TSS region	transcription start site region 50926
Gm43830	5	48790900 to 48791966	1066	-	unclassified gene	predicted gene 43830
Gm43319	5	48799010 to 48801279	2269	-	unclassified gene	predicted gene 43319
Gm42919	5	48802728 to 48804011	1283	-	unclassified gene	predicted gene 42919