Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:48310344-48762941

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42535 5 48324612 to 48326010 1398 + unclassified gene predicted gene 42535
Tssr50920 5 48331423 to 48331426 3 - TSS region transcription start site region 50920
Cpgi15847 5 48372105 to 48372662 557 CpG island CpG island 15847
Pacrgl 5 48372335 to 48388845 16510 + protein coding gene PARK2 co-regulated-like
Tssr46157 5 48372339 to 48372362 23 + TSS region transcription start site region 46157
Tssr46158 5 48372363 to 48372420 57 + TSS region transcription start site region 46158
Kcnip4 5 48389503 to 49524904 1135401 - protein coding gene Kv channel interacting protein 4
5730480H06Rik 5 48395573 to 48414294 18721 + protein coding gene RIKEN cDNA 5730480H06 gene
Tssr46159 5 48401017 to 48401024 7 + TSS region transcription start site region 46159
Hplq1 5 48413116 to 48413116 0 QTL hot plate latency 1
Gm43831 5 48535344 to 48537941 2597 - unclassified gene predicted gene 43831
Gm20700 5 48590889 to 48599994 9105 + antisense lncRNA gene predicted gene 20700
Tssr50921 5 48599987 to 48600000 13 - TSS region transcription start site region 50921
Gm43648 5 48624669 to 48627153 2484 - unclassified gene predicted gene 43648
Gm19031 5 48665905 to 48667269 1364 + pseudogene predicted gene, 19031
Tssr46160 5 48676430 to 48676436 6 + TSS region transcription start site region 46160
Gm43829 5 48712090 to 48715891 3801 - unclassified gene predicted gene 43829
Tssr50922 5 48749335 to 48749351 16 - TSS region transcription start site region 50922
Tssr50923 5 48754521 to 48754536 15 - TSS region transcription start site region 50923