Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:48272105-48472662

12 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slit2	5	47983138 to 48307733	324595	+	protein coding gene	slit guidance ligand 2
Gm42534	5	48279667 to 48281420	1753	+	unclassified gene	predicted gene 42534
Gm42535	5	48324612 to 48326010	1398	+	unclassified gene	predicted gene 42535
Tssr50920	5	48331423 to 48331426	3	-	TSS region	transcription start site region 50920
Cpgi15847	5	48372105 to 48372662	557		CpG island	CpG island 15847
Pacrgl	5	48372335 to 48388845	16510	+	protein coding gene	PARK2 co-regulated-like
Tssr46157	5	48372339 to 48372362	23	+	TSS region	transcription start site region 46157
Tssr46158	5	48372363 to 48372420	57	+	TSS region	transcription start site region 46158
Kcnip4	5	48389503 to 49524904	1135401	-	protein coding gene	Kv channel interacting protein 4
5730480H06Rik	5	48395573 to 48414294	18721	+	protein coding gene	RIKEN cDNA 5730480H06 gene
Tssr46159	5	48401017 to 48401024	7	+	TSS region	transcription start site region 46159
Hplq1	5	48413116 to 48413116	0		QTL	hot plate latency 1