Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:47089502-48180306

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43601 5 47153651 to 47154595 944 + unclassified gene predicted gene 43601
D5Mit80 5 47444973 to 47445136 163 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 80
Gm17824 5 47634502 to 47635306 804 + pseudogene predicted gene, 17824
Gm3010 5 47699845 to 47700292 447 + pseudogene predicted gene 3010
Alcp10 5 47866933 to 47867138 205 QTL alcohol preference locus 10, female specific
Alcp9 5 47866933 to 47867138 205 QTL alcohol preference locus 9, male specific
D5Mit11 5 47866933 to 47867138 205 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 11
Tssr46148 5 47869956 to 47869963 7 + TSS region transcription start site region 46148
Gm43427 5 47975005 to 47975335 330 + pseudogene predicted gene 43427
Cpgi15844 5 47982750 to 47984742 1992 CpG island CpG island 15844
Slit2 5 47983138 to 48307733 324595 + protein coding gene slit guidance ligand 2
Tssr46149 5 47983147 to 47983162 15 + TSS region transcription start site region 46149
Tssr46150 5 47984320 to 47984346 26 + TSS region transcription start site region 46150
Cpgi15845 5 47984931 to 47985314 383 CpG island CpG island 15845
Cpgi15846 5 47985877 to 47986518 641 CpG island CpG island 15846
Tssr46151 5 47990790 to 47990794 4 + TSS region transcription start site region 46151
Tssr46152 5 48001398 to 48001412 14 + TSS region transcription start site region 46152
Tssr46153 5 48001658 to 48001692 34 + TSS region transcription start site region 46153
4930518C09Rik 5 48003065 to 48005707 2642 - antisense lncRNA gene RIKEN cDNA 4930518C09 gene
Gm20475 5 48005784 to 48007923 2139 + sense intronic lncRNA gene predicted gene 20475
Tssr46154 5 48011140 to 48011151 11 + TSS region transcription start site region 46154
Tssr46155 5 48022891 to 48022894 3 + TSS region transcription start site region 46155
Tssr46156 5 48050546 to 48050551 5 + TSS region transcription start site region 46156
Gm43426 5 48058051 to 48060647 2596 + unclassified gene predicted gene 43426
Gm42536 5 48127084 to 48128696 1612 + unclassified gene predicted gene 42536