Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:45832551-46075408

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lcorl	5	45697181 to 45857615	160434	-	protein coding gene	ligand dependent nuclear receptor corepressor-like
Cpgi15842	5	45856088 to 45858207	2119		CpG island	CpG island 15842
Tssr50915	5	45856496 to 45856507	11	-	TSS region	transcription start site region 50915
Tssr46145	5	45857089 to 45857120	31	+	TSS region	transcription start site region 46145
Tssr50916	5	45857473 to 45857511	38	-	TSS region	transcription start site region 50916
4930449I04Rik	5	45857642 to 45858764	1122	+	protein coding gene	RIKEN cDNA 4930449I04 gene
4930405L22Rik	5	45926822 to 45932409	5587	-	lincRNA gene	RIKEN cDNA 4930405L22 gene
Gm40298	5	45932551 to 45975408	42857	+	lncRNA gene	predicted gene, 40298
D5Jcs614	5	45988819 to 45988991	172		DNA segment	DNA segment, Chr 5, John C. Schimenti 614
Tssr50917	5	46007542 to 46007557	15	-	TSS region	transcription start site region 50917
Tssr50918	5	46007570 to 46007581	11	-	TSS region	transcription start site region 50918
Tssr50919	5	46007591 to 46007602	11	-	TSS region	transcription start site region 50919
Tssr46146	5	46034408 to 46034421	13	+	TSS region	transcription start site region 46146