MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:45384389-45500138

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(5D5Mit148-Qdpr)2Jcs	5	31975890 to 45450229	13474339		chromosomal deletion	deletion, Chr 5, John C. Schimenti 2
D5Ertd615e	5	45009171 to 45424400	415229	-	lincRNA gene	DNA segment, Chr 5, ERATO Doi 615, expressed
Qdpr	5	45434032 to 45450229	16197	-	protein coding gene	quinoid dihydropteridine reductase
Gm42413	5	45434389 to 45450138	15749	+	antisense lncRNA gene	predicted gene, 42413
Tssr50902	5	45444591 to 45444606	15	-	TSS region	transcription start site region 50902
Cpgi15837	5	45449482 to 45450593	1111		CpG island	CpG island 15837
Tssr50903	5	45450121 to 45450139	18	-	TSS region	transcription start site region 50903
Tssr50904	5	45450143 to 45450201	58	-	TSS region	transcription start site region 50904
Tssr50905	5	45450211 to 45450220	9	-	TSS region	transcription start site region 50905
Tssr50906	5	45450221 to 45450230	9	-	TSS region	transcription start site region 50906
Clrn2	5	45453751 to 45464149	10398	+	protein coding gene	clarin 2
Cpgi15838	5	45493118 to 45494050	932		CpG island	CpG island 15838
Tssr1476	5	45493374 to 45493384	10	+	TSS region	transcription start site region 1476
Lap3	5	45493374 to 45512691	19317	+	protein coding gene	leucine aminopeptidase 3
Arp	5	45493374 to 45512691	19317		QTL	Arp lymphoid/erythroid hyperplasia
Tssr46135	5	45493385 to 45493437	52	+	TSS region	transcription start site region 46135
Tssr46136	5	45493449 to 45493466	17	+	TSS region	transcription start site region 46136
Tssr46137	5	45493481 to 45493498	17	+	TSS region	transcription start site region 46137