Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:44953652-45537307

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(5D5Mit148-Qdpr)2Jcs 5 31975890 to 45450229 13474339 chromosomal deletion deletion, Chr 5, John C. Schimenti 2
4930431F12Rik 5 44966201 to 44978805 12604 + lincRNA gene RIKEN cDNA 4930431F12 gene
Gm10205 5 44983861 to 44984242 381 - pseudogene predicted gene 10205
D5Mit106 5 44991378 to 44991539 161 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 106
D5Ertd615e 5 45009171 to 45424400 415229 - lincRNA gene DNA segment, Chr 5, ERATO Doi 615, expressed
Gm46912 5 45163341 to 45174979 11638 + lncRNA gene predicted gene, 46912
Gm43303 5 45192669 to 45251929 59260 - lincRNA gene predicted gene 43303
Gm42519 5 45243652 to 45247307 3655 - unclassified gene predicted gene 42519
Qdpr 5 45434032 to 45450229 16197 - protein coding gene quinoid dihydropteridine reductase
Gm42413 5 45434389 to 45450138 15749 + antisense lncRNA gene predicted gene, 42413
Tssr50902 5 45444591 to 45444606 15 - TSS region transcription start site region 50902
Cpgi15837 5 45449482 to 45450593 1111 CpG island CpG island 15837
Tssr50903 5 45450121 to 45450139 18 - TSS region transcription start site region 50903
Tssr50904 5 45450143 to 45450201 58 - TSS region transcription start site region 50904
Tssr50905 5 45450211 to 45450220 9 - TSS region transcription start site region 50905
Tssr50906 5 45450221 to 45450230 9 - TSS region transcription start site region 50906
Clrn2 5 45453751 to 45464149 10398 + protein coding gene clarin 2
Cpgi15838 5 45493118 to 45494050 932 CpG island CpG island 15838
Tssr1476 5 45493374 to 45493384 10 + TSS region transcription start site region 1476
Arp 5 45493374 to 45512691 19317 QTL Arp lymphoid/erythroid hyperplasia
Lap3 5 45493374 to 45512691 19317 + protein coding gene leucine aminopeptidase 3
Tssr46135 5 45493385 to 45493437 52 + TSS region transcription start site region 46135
Tssr46136 5 45493449 to 45493466 17 + TSS region transcription start site region 46136
Tssr46137 5 45493481 to 45493498 17 + TSS region transcription start site region 46137
Tssr46138 5 45512321 to 45512337 16 + TSS region transcription start site region 46138
Cpgi15839 5 45520147 to 45520816 669 CpG island CpG island 15839
Med28 5 45520229 to 45529276 9047 + protein coding gene mediator complex subunit 28
Tssr46139 5 45520282 to 45520327 45 + TSS region transcription start site region 46139
Tssr46140 5 45524062 to 45524069 7 + TSS region transcription start site region 46140
Fam184b 5 45529705 to 45639501 109796 - protein coding gene family with sequence similarity 184, member B
Gm42521 5 45531072 to 45533111 2039 + unclassified gene predicted gene 42521