Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:44125154-44276626

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35900	5	44108374 to 44133962	25588	-	lncRNA gene	predicted gene, 35900
Gm42429	5	44134393 to 44134950	557	+	unclassified gene	predicted gene 42429
Gm42428	5	44136620 to 44136921	301	+	lincRNA gene	predicted gene 42428
Gm42427	5	44137980 to 44143271	5291	+	unclassified gene	predicted gene 42427
Tssr50887	5	44169210 to 44169211	1	-	TSS region	transcription start site region 50887
D5Dcr57	5	44172200 to 44172295	95		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 57
Tapt1	5	44175154 to 44226626	51472	-	protein coding gene	transmembrane anterior posterior transformation 1
E430021H15Rik	5	44213801 to 44217259	3458	-	unclassified gene	RIKEN cDNA E430021H15 gene
Gm42982	5	44219683 to 44224003	4320	+	antisense lncRNA gene	predicted gene 42982
Tssr46132	5	44224505 to 44224515	10	+	TSS region	transcription start site region 46132
Gm42983	5	44224510 to 44225324	814	+	unclassified gene	predicted gene 42983
Cpgi15836	5	44225932 to 44227518	1586		CpG island	CpG island 15836
Gm42984	5	44226587 to 44243548	16961	+	antisense lncRNA gene	predicted gene 42984
Tssr50888	5	44226601 to 44226633	32	-	TSS region	transcription start site region 50888
Tssr50889	5	44226655 to 44226664	9	-	TSS region	transcription start site region 50889
Tssr46133	5	44226737 to 44226748	11	+	TSS region	transcription start site region 46133
Tssr46134	5	44226780 to 44226818	38	+	TSS region	transcription start site region 46134
Tssr50890	5	44226801 to 44226837	36	-	TSS region	transcription start site region 50890
Gm35959	5	44229330 to 44242162	12832	+	lncRNA gene	predicted gene, 35959