Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:43898064-43998391

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd38 5 43868809 to 43912374 43565 + protein coding gene CD38 antigen
Tssr46115 5 43900373 to 43900421 48 + TSS region transcription start site region 46115
Tssr46116 5 43901470 to 43901519 49 + TSS region transcription start site region 46116
Tssr46117 5 43901917 to 43901957 40 + TSS region transcription start site region 46117
Tssr46118 5 43908583 to 43908632 49 + TSS region transcription start site region 46118
Gm16015 5 43909215 to 43909885 670 - antisense lncRNA gene predicted gene 16015
Tssr50872 5 43909862 to 43909881 19 - TSS region transcription start site region 50872
Tssr1473 5 43910386 to 43910393 7 + TSS region transcription start site region 1473
Tssr46119 5 43910428 to 43910432 4 + TSS region transcription start site region 46119
Tssr46120 5 43910458 to 43910472 14 + TSS region transcription start site region 46120
Tssr46121 5 43910525 to 43910531 6 + TSS region transcription start site region 46121
Tssr46122 5 43910568 to 43910575 7 + TSS region transcription start site region 46122
Tssr46123 5 43910697 to 43910711 14 + TSS region transcription start site region 46123
Tssr46124 5 43910720 to 43910733 13 + TSS region transcription start site region 46124
Tssr46125 5 43910844 to 43910862 18 + TSS region transcription start site region 46125
Tssr46126 5 43910888 to 43910907 19 + TSS region transcription start site region 46126
Tssr46127 5 43910910 to 43910976 66 + TSS region transcription start site region 46127
Tssr46128 5 43911037 to 43911051 14 + TSS region transcription start site region 46128
Tssr46129 5 43911166 to 43911177 11 + TSS region transcription start site region 46129
Gm7879 5 43913144 to 43913904 760 + protein coding gene predicted pseudogene 7879
Tssr46130 5 43913146 to 43913151 5 + TSS region transcription start site region 46130
Gm7882 5 43916692 to 43918223 1531 + pseudogene predicted gene 7882
D5Dmo7 5 43943064 to 43943223 159 DNA segment DNA segment, Chr 5, David Ornitz 7
Gm5292 5 43943903 to 43944482 579 - pseudogene predicted gene 5292
Cpgi15834 5 43948064 to 43948391 327 CpG island CpG island 15834
Gm43183 5 43948116 to 43948662 546 + unclassified gene predicted gene 43183
Gm43184 5 43948120 to 43948661 541 - unclassified gene predicted gene 43184
Tssr50873 5 43948313 to 43948327 14 - TSS region transcription start site region 50873
Tssr46131 5 43948707 to 43948712 5 + TSS region transcription start site region 46131
D5Mit108 5 43953653 to 43953803 150 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 108
Fgfbp1 5 43978858 to 43981779 2921 - protein coding gene fibroblast growth factor binding protein 1
Tssr50874 5 43981757 to 43981773 16 - TSS region transcription start site region 50874
Tssr50875 5 43981782 to 43981794 12 - TSS region transcription start site region 50875
Tssr50876 5 43981800 to 43981809 9 - TSS region transcription start site region 50876
Prom1 5 43993620 to 44102032 108412 - protein coding gene prominin 1