Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:43811117-43901154

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D5Dmo8 5 43818633 to 43818764 131 DNA segment DNA segment, Chr 5, David Ornitz 8
Tssr46100 5 43818876 to 43818892 16 + TSS region transcription start site region 46100
Bst1 5 43818879 to 43843468 24589 + protein coding gene bone marrow stromal cell antigen 1
Tssr46101 5 43818899 to 43818928 29 + TSS region transcription start site region 46101
Tssr46102 5 43818939 to 43818954 15 + TSS region transcription start site region 46102
D5Jcs608 5 43820092 to 43820253 161 DNA segment DNA segment, Chr 5, John C. Schimenti 608
Tssr50865 5 43821778 to 43821799 21 - TSS region transcription start site region 50865
Tssr46103 5 43842117 to 43842138 21 + TSS region transcription start site region 46103
Tssr46104 5 43842965 to 43842980 15 + TSS region transcription start site region 46104
Tssr46105 5 43854368 to 43854398 30 + TSS region transcription start site region 46105
Tssr46106 5 43856117 to 43856154 37 + TSS region transcription start site region 46106
Tssr50866 5 43867814 to 43867826 12 - TSS region transcription start site region 50866
Tssr46107 5 43868532 to 43868546 14 + TSS region transcription start site region 46107
Tssr46108 5 43868653 to 43868666 13 + TSS region transcription start site region 46108
Tssr50867 5 43868687 to 43868699 12 - TSS region transcription start site region 50867
Tssr50868 5 43868748 to 43868762 14 - TSS region transcription start site region 50868
Tssr46109 5 43868802 to 43868866 64 + TSS region transcription start site region 46109
Cd38 5 43868809 to 43912374 43565 + protein coding gene CD38 antigen
Cpgi15833 5 43868959 to 43869293 334 CpG island CpG island 15833
Tssr50869 5 43869128 to 43869139 11 - TSS region transcription start site region 50869
Tssr50870 5 43869460 to 43869492 32 - TSS region transcription start site region 50870
Tssr46110 5 43869791 to 43869796 5 + TSS region transcription start site region 46110
Tssr46111 5 43875079 to 43875085 6 + TSS region transcription start site region 46111
Tssr46112 5 43875337 to 43875347 10 + TSS region transcription start site region 46112
Gm16014 5 43876030 to 43877304 1274 + sense intronic lncRNA gene predicted gene 16014
Tssr46113 5 43879925 to 43879932 7 + TSS region transcription start site region 46113
Tssr50871 5 43881922 to 43881928 6 - TSS region transcription start site region 50871
Tssr46114 5 43882544 to 43882553 9 + TSS region transcription start site region 46114
Tssr46115 5 43900373 to 43900421 48 + TSS region transcription start site region 46115