MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:43460538-43673803

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43021	5	43470692 to 43474853	4161	+	lincRNA gene	predicted gene 43021
Tssr46087	5	43515476 to 43515485	9	+	TSS region	transcription start site region 46087
Tssr46088	5	43515513 to 43515534	21	+	TSS region	transcription start site region 46088
C1qtnf7	5	43515538 to 43618803	103265	+	protein coding gene	C1q and tumor necrosis factor related protein 7
Tssr46089	5	43515751 to 43515794	43	+	TSS region	transcription start site region 46089
Tssr46090	5	43515806 to 43515818	12	+	TSS region	transcription start site region 46090
Tssr46091	5	43515921 to 43515930	9	+	TSS region	transcription start site region 46091
Gm43022	5	43528626 to 43532893	4267	+	unclassified gene	predicted gene 43022
Gm15866	5	43555746 to 43575836	20090	-	antisense lncRNA gene	predicted gene 15866
Gm43023	5	43575821 to 43577926	2105	+	unclassified gene	predicted gene 43023
Tssr46092	5	43662373 to 43662384	11	+	TSS region	transcription start site region 46092
Cc2d2a	5	43662373 to 43740975	78602	+	protein coding gene	coiled-coil and C2 domain containing 2A
Tssr46093	5	43662386 to 43662406	20	+	TSS region	transcription start site region 46093
Tssr46094	5	43665449 to 43665463	14	+	TSS region	transcription start site region 46094
Gm35762	5	43670560 to 43671943	1383	-	lncRNA gene	predicted gene, 35762
Tssr1472	5	43672289 to 43672300	11	+	TSS region	transcription start site region 1472
Tssr46095	5	43672304 to 43672326	22	+	TSS region	transcription start site region 46095
Tssr46096	5	43672329 to 43672355	26	+	TSS region	transcription start site region 46096