MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:43213886-43253895

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm7854	5	43151686 to 43235354	83668	-	antisense lncRNA gene	predicted gene 7854
Gm46911	5	43208701 to 43216243	7542	+	protein coding gene	predicted gene, 46911
Cpgi15830	5	43232441 to 43235578	3137		CpG island	CpG island 15830
Tssr50857	5	43232777 to 43232846	69	-	TSS region	transcription start site region 50857
Cpeb2	5	43233170 to 43289724	56554	+	protein coding gene	cytoplasmic polyadenylation element binding protein 2
Tssr46076	5	43233217 to 43233237	20	+	TSS region	transcription start site region 46076
Tssr46077	5	43233243 to 43233259	16	+	TSS region	transcription start site region 46077
Tssr46078	5	43233485 to 43233491	6	+	TSS region	transcription start site region 46078
Tssr46079	5	43233677 to 43233685	8	+	TSS region	transcription start site region 46079
Tssr46080	5	43233694 to 43233703	9	+	TSS region	transcription start site region 46080
Tssr46081	5	43233714 to 43233717	3	+	TSS region	transcription start site region 46081
Tssr46082	5	43233732 to 43233741	9	+	TSS region	transcription start site region 46082
Tssr50858	5	43233833 to 43233839	6	-	TSS region	transcription start site region 50858
Tssr46083	5	43233886 to 43233895	9	+	TSS region	transcription start site region 46083
Tssr46084	5	43233928 to 43233951	23	+	TSS region	transcription start site region 46084
Tssr46085	5	43233962 to 43233979	17	+	TSS region	transcription start site region 46085
Gm42551	5	43248185 to 43249757	1572	+	unclassified gene	predicted gene 42551
Tssr46086	5	43251698 to 43251713	15	+	TSS region	transcription start site region 46086