MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:41802112-42402217

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bod1l	5	41787538 to 41844315	56777	-	protein coding gene	biorientation of chromosomes in cell division 1-like
Tssr50848	5	41807195 to 41807227	32	-	TSS region	transcription start site region 50848
Tssr50849	5	41810079 to 41810105	26	-	TSS region	transcription start site region 50849
Tssr50850	5	41819007 to 41819024	17	-	TSS region	transcription start site region 50850
Tssr50851	5	41819383 to 41819391	8	-	TSS region	transcription start site region 50851
Tssr50852	5	41821438 to 41821461	23	-	TSS region	transcription start site region 50852
Tssr50853	5	41828837 to 41828850	13	-	TSS region	transcription start site region 50853
Tssr50854	5	41832565 to 41832587	22	-	TSS region	transcription start site region 50854
Cpgi15829	5	41843670 to 41844607	937		CpG island	CpG island 15829
Tssr50855	5	41844232 to 41844329	97	-	TSS region	transcription start site region 50855
Gm5298	5	41853310 to 41854201	891	-	pseudogene	predicted gene 5298
D5Dcr56	5	41878493 to 41878601	108		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 56
Mir6414	5	41891342 to 41891423	81	+	miRNA gene	microRNA 6414
Gm20156	5	41934397 to 41935672	1275	-	pseudogene	predicted gene, 20156
Gm40294	5	42052935 to 42057050	4115	+	lncRNA gene	predicted gene, 40294
Gm16223	5	42067960 to 42216784	148824	+	protein coding gene	predicted gene 16223
D5Mit196	5	42102112 to 42102217	105		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 196
D5Mit129	5	42131193 to 42131340	147		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 129