Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:41746342-42036423

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15823 5 41754831 to 41754992 161 CpG island CpG island 15823
Cpgi15824 5 41755486 to 41755878 392 CpG island CpG island 15824
Cpgi15825 5 41761214 to 41762414 1200 CpG island CpG island 15825
Nkx3-2 5 41761483 to 41764220 2737 - protein coding gene NK3 homeobox 2
Gm46910 5 41762187 to 41765085 2898 + lncRNA gene predicted gene, 46910
Tssr46071 5 41762653 to 41762664 11 + TSS region transcription start site region 46071
Cpgi15826 5 41763082 to 41764711 1629 CpG island CpG island 15826
Tssr50844 5 41764038 to 41764042 4 - TSS region transcription start site region 50844
Tssr50845 5 41764493 to 41764494 1 - TSS region transcription start site region 50845
Tssr50846 5 41764549 to 41764561 12 - TSS region transcription start site region 50846
Cpgi15827 5 41766706 to 41767833 1127 CpG island CpG island 15827
Tssr46072 5 41767659 to 41767663 4 + TSS region transcription start site region 46072
Cpgi15828 5 41768427 to 41768623 196 CpG island CpG island 15828
D5Mit104 5 41774200 to 41774344 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 104
Bod1l 5 41787538 to 41844315 56777 - protein coding gene biorientation of chromosomes in cell division 1-like
Tssr50847 5 41799918 to 41799938 20 - TSS region transcription start site region 50847
Tssr50848 5 41807195 to 41807227 32 - TSS region transcription start site region 50848
Tssr50849 5 41810079 to 41810105 26 - TSS region transcription start site region 50849
Tssr50850 5 41819007 to 41819024 17 - TSS region transcription start site region 50850
Tssr50851 5 41819383 to 41819391 8 - TSS region transcription start site region 50851
Tssr50852 5 41821438 to 41821461 23 - TSS region transcription start site region 50852
Tssr50853 5 41828837 to 41828850 13 - TSS region transcription start site region 50853
Tssr50854 5 41832565 to 41832587 22 - TSS region transcription start site region 50854
Cpgi15829 5 41843670 to 41844607 937 CpG island CpG island 15829
Tssr50855 5 41844232 to 41844329 97 - TSS region transcription start site region 50855
Gm5298 5 41853310 to 41854201 891 - pseudogene predicted gene 5298
D5Dcr56 5 41878493 to 41878601 108 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 56
Mir6414 5 41891342 to 41891423 81 + miRNA gene microRNA 6414
Gm20156 5 41934397 to 41935672 1275 - pseudogene predicted gene, 20156