Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:41584156-41784161

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35380 5 41605819 to 41616325 10506 - lncRNA gene predicted gene, 35380
Rab28 5 41624976 to 41708157 83181 - protein coding gene RAB28, member RAS oncogene family
Tssr50835 5 41636981 to 41636985 4 - TSS region transcription start site region 50835
Tssr50836 5 41684156 to 41684161 5 - TSS region transcription start site region 50836
Tssr50837 5 41701287 to 41701329 42 - TSS region transcription start site region 50837
Tssr50838 5 41706912 to 41706916 4 - TSS region transcription start site region 50838
Cpgi15822 5 41707039 to 41708563 1524 CpG island CpG island 15822
Tssr46070 5 41707170 to 41707178 8 + TSS region transcription start site region 46070
Tssr50839 5 41707417 to 41707429 12 - TSS region transcription start site region 50839
Tssr50840 5 41707670 to 41707681 11 - TSS region transcription start site region 50840
Tssr50841 5 41707969 to 41708014 45 - TSS region transcription start site region 50841
Tssr50842 5 41708118 to 41708129 11 - TSS region transcription start site region 50842
Tssr50843 5 41708135 to 41708170 35 - TSS region transcription start site region 50843
Gm19004 5 41717092 to 41717625 533 + pseudogene predicted gene, 19004
Cpgi15823 5 41754831 to 41754992 161 CpG island CpG island 15823
Cpgi15824 5 41755486 to 41755878 392 CpG island CpG island 15824
Cpgi15825 5 41761214 to 41762414 1200 CpG island CpG island 15825
Nkx3-2 5 41761483 to 41764220 2737 - protein coding gene NK3 homeobox 2
Gm46910 5 41762187 to 41765085 2898 + lncRNA gene predicted gene, 46910
Tssr46071 5 41762653 to 41762664 11 + TSS region transcription start site region 46071
Cpgi15826 5 41763082 to 41764711 1629 CpG island CpG island 15826
Tssr50844 5 41764038 to 41764042 4 - TSS region transcription start site region 50844
Tssr50845 5 41764493 to 41764494 1 - TSS region transcription start site region 50845
Tssr50846 5 41764549 to 41764561 12 - TSS region transcription start site region 50846
Cpgi15827 5 41766706 to 41767833 1127 CpG island CpG island 15827
Tssr46072 5 41767659 to 41767663 4 + TSS region transcription start site region 46072
Cpgi15828 5 41768427 to 41768623 196 CpG island CpG island 15828
D5Mit104 5 41774200 to 41774344 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 104