Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:39513935-39745143

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930513D17Rik	5	39461749 to 39603574	141825	-	lincRNA gene	RIKEN cDNA 4930513D17 gene
Gm25377	5	39520976 to 39521104	128	-	snoRNA gene	predicted gene, 25377
Tssr50827	5	39603521 to 39603536	15	-	TSS region	transcription start site region 50827
Gm42528	5	39606927 to 39610344	3417	-	unclassified gene	predicted gene 42528
Hs3st1	5	39613935 to 39645143	31208	-	protein coding gene	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Tssr50828	5	39614975 to 39614993	18	-	TSS region	transcription start site region 50828
Tssr50829	5	39615066 to 39615100	34	-	TSS region	transcription start site region 50829
Cpgi15819	5	39620755 to 39621220	465		CpG island	CpG island 15819
Tssr50830	5	39641867 to 39641894	27	-	TSS region	transcription start site region 50830
Tssr50831	5	39643825 to 39643865	40	-	TSS region	transcription start site region 50831
Cpgi15820	5	39644067 to 39645331	1264		CpG island	CpG island 15820
Tssr50832	5	39644601 to 39644619	18	-	TSS region	transcription start site region 50832
Tssr50833	5	39644644 to 39644649	5	-	TSS region	transcription start site region 50833
D5Dmo6	5	39645528 to 39645697	169		DNA segment	DNA segment, Chr 5, David Ornitz 6