MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:3909005-4070705

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr45071	5	3909290 to 3909299	9	+	TSS region	transcription start site region 45071
Tssr45072	5	3909310 to 3909321	11	+	TSS region	transcription start site region 45072
Tssr1415	5	3927533 to 3927544	11	+	TSS region	transcription start site region 1415
Tssr45073	5	3927821 to 3927843	22	+	TSS region	transcription start site region 45073
Akap9	5	3927827 to 4080204	152377	+	protein coding gene	A kinase (PRKA) anchor protein (yotiao) 9
Tssr45074	5	3927857 to 3927888	31	+	TSS region	transcription start site region 45074
Cpgi15515	5	3927864 to 3928991	1127		CpG island	CpG island 15515
Tssr45075	5	3928033 to 3928103	70	+	TSS region	transcription start site region 45075
Tssr45076	5	3928267 to 3928300	33	+	TSS region	transcription start site region 45076
Tssr45077	5	3936518 to 3936522	4	+	TSS region	transcription start site region 45077
Tssr45078	5	3957736 to 3957754	18	+	TSS region	transcription start site region 45078
Tssr45079	5	3981382 to 3981386	4	+	TSS region	transcription start site region 45079
Wdr46-ps	5	3989005 to 3990705	1700	+	pseudogene	Wdr46 retrotransposed pseudogene
Tssr45080	5	3995033 to 3995035	2	+	TSS region	transcription start site region 45080
Tssr45081	5	4005314 to 4005336	22	+	TSS region	transcription start site region 45081
Tssr45082	5	4023304 to 4023318	14	+	TSS region	transcription start site region 45082
Tssr45083	5	4023343 to 4023357	14	+	TSS region	transcription start site region 45083
Tssr45084	5	4038983 to 4039001	18	+	TSS region	transcription start site region 45084