Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:38672016-39509460

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp518b 5 38668484 to 38684826 16342 - protein coding gene zinc finger protein 518B
Cpgi15818 5 38684057 to 38685165 1108 CpG island CpG island 15818
Tssr50821 5 38684743 to 38684813 70 - TSS region transcription start site region 50821
Gm40291 5 38684923 to 38706674 21751 + lncRNA gene predicted gene, 40291
Gm22779 5 38699706 to 38699812 106 - snRNA gene predicted gene, 22779
Clnk 5 38706462 to 38876812 170350 - protein coding gene cytokine-dependent hematopoietic cell linker
Gm34720 5 38706768 to 38709550 2782 + lncRNA gene predicted gene, 34720
Clnkos 5 38735983 to 38747897 11914 + antisense lncRNA gene cytokine-dependent hematopoietic cell linker, opposite strand
Tssr50822 5 38771890 to 38771895 5 - TSS region transcription start site region 50822
D5Dmo5 5 38827879 to 38828003 124 DNA segment DNA segment, Chr 5, David Ornitz 5
Tssr50823 5 38876708 to 38876757 49 - TSS region transcription start site region 50823
Tssr50824 5 38936872 to 38936879 7 - TSS region transcription start site region 50824
Gm42857 5 39002693 to 39003031 338 - pseudogene predicted gene 42857
Gm46937 5 39082016 to 39099460 17444 + lncRNA gene predicted gene, 46937
Gm40293 5 39253950 to 39307084 53134 - lincRNA gene predicted gene, 40293
Gm40292 5 39307120 to 39313295 6175 + lincRNA gene predicted gene, 40292
Tssr46064 5 39307123 to 39307133 10 + TSS region transcription start site region 46064
Gm43456 5 39337360 to 39337816 456 - pseudogene predicted gene 43456
Tssr50825 5 39338859 to 39338880 21 - TSS region transcription start site region 50825
Tssr50826 5 39338896 to 39338910 14 - TSS region transcription start site region 50826
Gm25505 5 39346691 to 39346936 245 + unclassified non-coding RNA gene predicted gene, 25505
Gm5291 5 39401347 to 39402245 898 - pseudogene predicted gene 5291
4930421C12Rik 5 39442001 to 39443574 1573 - unclassified gene RIKEN cDNA 4930421C12 gene
Gm42524 5 39458097 to 39477679 19582 + lincRNA gene predicted gene 42524
4930513D17Rik 5 39461749 to 39603574 141825 - lincRNA gene RIKEN cDNA 4930513D17 gene