Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:38556768-38859550

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wdr1 5 38526813 to 38561800 34987 - protein coding gene WD repeat domain 1
Cpgi15817 5 38560613 to 38562183 1570 CpG island CpG island 15817
Tssr50812 5 38561124 to 38561141 17 - TSS region transcription start site region 50812
Tssr50813 5 38561155 to 38561171 16 - TSS region transcription start site region 50813
Tssr50814 5 38561554 to 38561622 68 - TSS region transcription start site region 50814
Tssr50815 5 38561625 to 38561640 15 - TSS region transcription start site region 50815
Tssr50816 5 38561658 to 38561680 22 - TSS region transcription start site region 50816
Tssr50817 5 38561682 to 38561732 50 - TSS region transcription start site region 50817
Tssr50818 5 38561787 to 38561792 5 - TSS region transcription start site region 50818
Tssr46063 5 38561895 to 38561925 30 + TSS region transcription start site region 46063
Tssr50819 5 38563215 to 38563234 19 - TSS region transcription start site region 50819
Tssr50820 5 38563244 to 38563252 8 - TSS region transcription start site region 50820
4930421P07Rik 5 38575031 to 38575429 398 + pseudogene RIKEN cDNA 4930421P07 gene
Zfp518b 5 38668484 to 38684826 16342 - protein coding gene zinc finger protein 518B
Cpgi15818 5 38684057 to 38685165 1108 CpG island CpG island 15818
Tssr50821 5 38684743 to 38684813 70 - TSS region transcription start site region 50821
Gm40291 5 38684923 to 38706674 21751 + lncRNA gene predicted gene, 40291
Gm22779 5 38699706 to 38699812 106 - snRNA gene predicted gene, 22779
Clnk 5 38706462 to 38876812 170350 - protein coding gene cytokine-dependent hematopoietic cell linker
Gm34720 5 38706768 to 38709550 2782 + lncRNA gene predicted gene, 34720
Clnkos 5 38735983 to 38747897 11914 + antisense lncRNA gene cytokine-dependent hematopoietic cell linker, opposite strand
Tssr50822 5 38771890 to 38771895 5 - TSS region transcription start site region 50822
D5Dmo5 5 38827879 to 38828003 124 DNA segment DNA segment, Chr 5, David Ornitz 5