Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:38498215-38628234

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc2a9 5 38349273 to 38503143 153870 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 9
Tssr46059 5 38500162 to 38500168 6 + TSS region transcription start site region 46059
Tssr50803 5 38502090 to 38502101 11 - TSS region transcription start site region 50803
Tssr50804 5 38502107 to 38502126 19 - TSS region transcription start site region 50804
Tssr50805 5 38502133 to 38502141 8 - TSS region transcription start site region 50805
Tssr46060 5 38505292 to 38505293 1 + TSS region transcription start site region 46060
Gm15796 5 38507463 to 38507666 203 + pseudogene predicted gene 15796
Tssr46061 5 38508057 to 38508075 18 + TSS region transcription start site region 46061
D5Mit77 5 38509952 to 38510060 108 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 77
Skts3 5 38509952 to 38510060 108 QTL skin tumor susceptibility 3
Tssr50806 5 38521489 to 38521498 9 - TSS region transcription start site region 50806
Wdr1 5 38526813 to 38561800 34987 - protein coding gene WD repeat domain 1
Tssr50807 5 38527195 to 38527213 18 - TSS region transcription start site region 50807
Tssr50808 5 38527280 to 38527297 17 - TSS region transcription start site region 50808
Tssr50809 5 38527681 to 38527693 12 - TSS region transcription start site region 50809
Tssr50810 5 38540211 to 38540236 25 - TSS region transcription start site region 50810
Tssr46062 5 38546454 to 38546460 6 + TSS region transcription start site region 46062
Gm22249 5 38546458 to 38546593 135 + snRNA gene predicted gene, 22249
Tssr50811 5 38546463 to 38546472 9 - TSS region transcription start site region 50811
Cpgi15817 5 38560613 to 38562183 1570 CpG island CpG island 15817
Tssr50812 5 38561124 to 38561141 17 - TSS region transcription start site region 50812
Tssr50813 5 38561155 to 38561171 16 - TSS region transcription start site region 50813
Tssr50814 5 38561554 to 38561622 68 - TSS region transcription start site region 50814
Tssr50815 5 38561625 to 38561640 15 - TSS region transcription start site region 50815
Tssr50816 5 38561658 to 38561680 22 - TSS region transcription start site region 50816
Tssr50817 5 38561682 to 38561732 50 - TSS region transcription start site region 50817
Tssr50818 5 38561787 to 38561792 5 - TSS region transcription start site region 50818
Tssr46063 5 38561895 to 38561925 30 + TSS region transcription start site region 46063
Tssr50819 5 38563215 to 38563234 19 - TSS region transcription start site region 50819
Tssr50820 5 38563244 to 38563252 8 - TSS region transcription start site region 50820
4930421P07Rik 5 38575031 to 38575429 398 + pseudogene RIKEN cDNA 4930421P07 gene