Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:3827857-4027888

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Krit1 5 3803165 to 3844515 41350 + protein coding gene KRIT1, ankyrin repeat containing
Cpgi15514 5 3844945 to 3845449 504 CpG island CpG island 15514
Tssr50000 5 3845017 to 3845050 33 - TSS region transcription start site region 50000
Tssr45069 5 3845171 to 3845192 21 + TSS region transcription start site region 45069
Lrrd1 5 3845173 to 3866596 21423 + protein coding gene leucine rich repeats and death domain containing 1
Tssr45070 5 3845195 to 3845202 7 + TSS region transcription start site region 45070
Rps4x-ps 5 3875362 to 3876154 792 + pseudogene Rps4x retrotransposed pseudogene
Mterf1a 5 3890581 to 3893933 3352 - protein coding gene mitochondrial transcription termination factor 1a
Tssr45071 5 3909290 to 3909299 9 + TSS region transcription start site region 45071
Tssr45072 5 3909310 to 3909321 11 + TSS region transcription start site region 45072
Tssr1415 5 3927533 to 3927544 11 + TSS region transcription start site region 1415
Tssr45073 5 3927821 to 3927843 22 + TSS region transcription start site region 45073
Akap9 5 3927827 to 4080204 152377 + protein coding gene A kinase (PRKA) anchor protein (yotiao) 9
Tssr45074 5 3927857 to 3927888 31 + TSS region transcription start site region 45074
Cpgi15515 5 3927864 to 3928991 1127 CpG island CpG island 15515
Tssr45075 5 3928033 to 3928103 70 + TSS region transcription start site region 45075
Tssr45076 5 3928267 to 3928300 33 + TSS region transcription start site region 45076
Tssr45077 5 3936518 to 3936522 4 + TSS region transcription start site region 45077
Tssr45078 5 3957736 to 3957754 18 + TSS region transcription start site region 45078
Tssr45079 5 3981382 to 3981386 4 + TSS region transcription start site region 45079
Wdr46-ps 5 3989005 to 3990705 1700 + pseudogene Wdr46 retrotransposed pseudogene
Tssr45080 5 3995033 to 3995035 2 + TSS region transcription start site region 45080
Tssr45081 5 4005314 to 4005336 22 + TSS region transcription start site region 45081
Tssr45082 5 4023304 to 4023318 14 + TSS region transcription start site region 45082
Tssr45083 5 4023343 to 4023357 14 + TSS region transcription start site region 45083