MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:38269402-38419423

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmem128	5	38260190 to 38269618	9428	+	protein coding gene	transmembrane protein 128
Cpgi15812	5	38276209 to 38278385	2176		CpG island	CpG island 15812
Tssr46055	5	38277167 to 38277190	23	+	TSS region	transcription start site region 46055
Tssr46056	5	38277397 to 38277423	26	+	TSS region	transcription start site region 46056
Otop1	5	38277404 to 38304217	26813	+	protein coding gene	otopetrin 1
Tssr46057	5	38277445 to 38277464	19	+	TSS region	transcription start site region 46057
Cpgi15813	5	38299777 to 38300418	641		CpG island	CpG island 15813
Cpgi15814	5	38307673 to 38308102	429		CpG island	CpG island 15814
Gm34193	5	38313596 to 38316011	2415	+	lncRNA gene	predicted gene, 34193
Gm26560	5	38317333 to 38320897	3564	-	antisense lncRNA gene	predicted gene, 26560
Cpgi15815	5	38318851 to 38320805	1954		CpG island	CpG island 15815
Drd5	5	38319509 to 38322523	3014	+	protein coding gene	dopamine receptor D5
Tssr1469	5	38320231 to 38320234	3	+	TSS region	transcription start site region 1469
Tssr50797	5	38344326 to 38344328	2	-	TSS region	transcription start site region 50797
Tssr46058	5	38344402 to 38344423	21	+	TSS region	transcription start site region 46058
4930487D11Rik	5	38344435 to 38349197	4762	+	lincRNA gene	RIKEN cDNA 4930487D11 gene
Slc2a9	5	38349273 to 38503143	153870	-	protein coding gene	solute carrier family 2 (facilitated glucose transporter), member 9
Gm40290	5	38354562 to 38362560	7998	+	lncRNA gene	predicted gene, 40290
D5Dmo4	5	38393052 to 38393278	226		DNA segment	DNA segment, Chr 5, David Ornitz 4