MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:38098691-38220352

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stx18	5	38038742 to 38137765	99023	+	protein coding gene	syntaxin 18
Tssr46043	5	38108142 to 38108150	8	+	TSS region	transcription start site region 46043
D5Wsu148e	5	38128456 to 38128705	249		DNA segment	DNA segment, Chr 5, Wayne State University 148, expressed
Gm42858	5	38134394 to 38136097	1703	-	unclassified gene	predicted gene 42858
Nsg1	5	38137192 to 38159467	22275	-	protein coding gene	neuron specific gene family member 1
Cpgi15809	5	38158691 to 38160352	1661		CpG island	CpG island 15809
Tssr50785	5	38158911 to 38158921	10	-	TSS region	transcription start site region 50785
Tssr50786	5	38158984 to 38158995	11	-	TSS region	transcription start site region 50786
Tssr50787	5	38159407 to 38159454	47	-	TSS region	transcription start site region 50787
Tssr50788	5	38159457 to 38159491	34	-	TSS region	transcription start site region 50788
Tssr50789	5	38159499 to 38159517	18	-	TSS region	transcription start site region 50789
Tssr50790	5	38159539 to 38159546	7	-	TSS region	transcription start site region 50790
Tssr50791	5	38159565 to 38159578	13	-	TSS region	transcription start site region 50791
Tssr50792	5	38159724 to 38159743	19	-	TSS region	transcription start site region 50792
D5Dmo3	5	38167229 to 38167327	98		DNA segment	DNA segment, Chr 5, David Ornitz 3
Zbtb49	5	38189732 to 38220449	30717	-	protein coding gene	zinc finger and BTB domain containing 49
Cpgi15810	5	38219759 to 38221039	1280		CpG island	CpG island 15810
Tssr46044	5	38219960 to 38219970	10	+	TSS region	transcription start site region 46044