MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:3736058-3876062

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ankib1	5	3690000 to 3802925	112925	-	protein coding gene	ankyrin repeat and IBR domain containing 1
D5Mit330	5	3744808 to 3744899	91		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 330
Gm43679	5	3751901 to 3755577	3676	-	unclassified gene	predicted gene 43679
Cpgi15513	5	3802145 to 3803802	1657		CpG island	CpG island 15513
Tssr49997	5	3802858 to 3802875	17	-	TSS region	transcription start site region 49997
Tssr49998	5	3803062 to 3803079	17	-	TSS region	transcription start site region 49998
Tssr49999	5	3803081 to 3803119	38	-	TSS region	transcription start site region 49999
Tssr45066	5	3803160 to 3803193	33	+	TSS region	transcription start site region 45066
Krit1	5	3803165 to 3844515	41350	+	protein coding gene	KRIT1, ankyrin repeat containing
Tssr45067	5	3803195 to 3803206	11	+	TSS region	transcription start site region 45067
Tssr1414	5	3803209 to 3803220	11	+	TSS region	transcription start site region 1414
Tssr45068	5	3806058 to 3806062	4	+	TSS region	transcription start site region 45068
Cpgi15514	5	3844945 to 3845449	504		CpG island	CpG island 15514
Tssr50000	5	3845017 to 3845050	33	-	TSS region	transcription start site region 50000
Tssr45069	5	3845171 to 3845192	21	+	TSS region	transcription start site region 45069
Lrrd1	5	3845173 to 3866596	21423	+	protein coding gene	leucine rich repeats and death domain containing 1
Tssr45070	5	3845195 to 3845202	7	+	TSS region	transcription start site region 45070
Rps4x-ps	5	3875362 to 3876154	792	+	pseudogene	Rps4x retrotransposed pseudogene