Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:37082086-37402091

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jakmip1 5 37028335 to 37150607 122272 + protein coding gene janus kinase and microtubule interacting protein 1
Cpgi15792 5 37091013 to 37091758 745 CpG island CpG island 15792
Tssr46010 5 37091074 to 37091085 11 + TSS region transcription start site region 46010
Tssr46011 5 37091483 to 37091523 40 + TSS region transcription start site region 46011
Gm25551 5 37092258 to 37092360 102 - rRNA gene predicted gene, 25551
D5Jcs57 5 37143718 to 37143855 137 DNA segment DNA segment, Chr 5, John C. Schimenti 57
Gm1043 5 37153129 to 37234484 81355 + protein coding gene predicted gene 1043
Tssr1463 5 37154335 to 37154345 10 + TSS region transcription start site region 1463
Cpgi15793 5 37162725 to 37163837 1112 CpG island CpG island 15793
D5Jcs58 5 37228126 to 37228287 161 DNA segment DNA segment, Chr 5, John C. Schimenti 58
Tssr46012 5 37229088 to 37229091 3 + TSS region transcription start site region 46012
Cpgi15794 5 37241411 to 37242981 1570 CpG island CpG island 15794
Tssr46013 5 37242025 to 37242081 56 + TSS region transcription start site region 46013
Crmp1 5 37242058 to 37292163 50105 + protein coding gene collapsin response mediator protein 1
Tssr46014 5 37242086 to 37242091 5 + TSS region transcription start site region 46014
Tssr46015 5 37242093 to 37242100 7 + TSS region transcription start site region 46015
Tssr46016 5 37242322 to 37242342 20 + TSS region transcription start site region 46016
Cpgi15795 5 37245251 to 37246729 1478 CpG island CpG island 15795
Tssr1464 5 37245754 to 37245761 7 + TSS region transcription start site region 1464
Tssr46017 5 37245823 to 37245883 60 + TSS region transcription start site region 46017
Tssr46018 5 37245938 to 37245949 11 + TSS region transcription start site region 46018
Tssr1465 5 37276268 to 37276304 36 + TSS region transcription start site region 1465
Tssr46019 5 37279661 to 37279671 10 + TSS region transcription start site region 46019
Tssr46020 5 37280549 to 37280573 24 + TSS region transcription start site region 46020
Tssr46021 5 37282905 to 37282925 20 + TSS region transcription start site region 46021
Tssr46022 5 37286387 to 37286410 23 + TSS region transcription start site region 46022
Tssr46023 5 37286430 to 37286441 11 + TSS region transcription start site region 46023
Tssr46024 5 37286471 to 37286490 19 + TSS region transcription start site region 46024
Tssr46025 5 37288841 to 37288874 33 + TSS region transcription start site region 46025
Tssr46026 5 37288912 to 37288933 21 + TSS region transcription start site region 46026
Evc 5 37289098 to 37336894 47796 - protein coding gene EvC ciliary complex subunit 1
Tssr46027 5 37291362 to 37291385 23 + TSS region transcription start site region 46027
Gm42935 5 37297630 to 37297780 150 - pseudogene predicted gene 42935
D5Jcs59 5 37319153 to 37319284 131 DNA segment DNA segment, Chr 5, John C. Schimenti 59
Cpgi15796 5 37336388 to 37337196 808 CpG island CpG island 15796
Tssr50776 5 37336837 to 37336864 27 - TSS region transcription start site region 50776
Tssr50777 5 37336870 to 37336899 29 - TSS region transcription start site region 50777
Tssr50778 5 37336934 to 37336945 11 - TSS region transcription start site region 50778
Cpgi15797 5 37338316 to 37338866 550 CpG island CpG island 15797
Tssr46028 5 37338455 to 37338551 96 + TSS region transcription start site region 46028
Evc2 5 37338499 to 37425055 86556 + protein coding gene EvC ciliary complex subunit 2
Tssr46029 5 37338599 to 37338619 20 + TSS region transcription start site region 46029
Tssr46030 5 37392014 to 37392019 5 + TSS region transcription start site region 46030