Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:36922402-37172418

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(5D5Mit73-D5Mit351)5Jcs 5 26600987 to 37019120 10418133 chromosomal deletion deletion, Chr 5, John C. Schimenti 5
Del(5D5Mit73-D5Mit351)1J 5 26600987 to 37019120 10418133 chromosomal deletion deletion Chr 5, Jackson 1
Del(5D5Mit388-D5Mit351)4Jcs 5 33318099 to 37019120 3701021 chromosomal deletion deletion, Chr 5, John C. Schimenti 4
Ppp2r2c 5 36868513 to 36955078 86565 + protein coding gene protein phosphatase 2, regulatory subunit B, gamma
Tssr45993 5 36923000 to 36923011 11 + TSS region transcription start site region 45993
Tssr45994 5 36936527 to 36936528 1 + TSS region transcription start site region 45994
Tssr45995 5 36954053 to 36954058 5 + TSS region transcription start site region 45995
Wfs1 5 36966104 to 36988982 22878 - protein coding gene wolframin ER transmembrane glycoprotein
D5Dmo1 5 36966691 to 36966851 160 DNA segment DNA segment, Chr 5, David Ornitz 1
Cpgi15790 5 36988414 to 36989456 1042 CpG island CpG island 15790
Tssr50775 5 36988922 to 36988970 48 - TSS region transcription start site region 50775
D5Mit351 5 37019013 to 37019120 107 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 351
D5Mit351.1 5 37019182 to 37019314 132 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 351.1
Cpgi15791 5 37027909 to 37029835 1926 CpG island CpG island 15791
Tssr45996 5 37028317 to 37028328 11 + TSS region transcription start site region 45996
Tssr45997 5 37028329 to 37028376 47 + TSS region transcription start site region 45997
Jakmip1 5 37028335 to 37150607 122272 + protein coding gene janus kinase and microtubule interacting protein 1
Tssr45998 5 37028458 to 37028491 33 + TSS region transcription start site region 45998
Gm26647 5 37038164 to 37041646 3482 - antisense lncRNA gene predicted gene, 26647
Tssr45999 5 37044943 to 37044958 15 + TSS region transcription start site region 45999
Tssr46000 5 37046995 to 37047014 19 + TSS region transcription start site region 46000
Tssr46001 5 37047027 to 37047044 17 + TSS region transcription start site region 46001
Tssr46002 5 37047079 to 37047100 21 + TSS region transcription start site region 46002
Tssr46003 5 37047109 to 37047125 16 + TSS region transcription start site region 46003
Tssr46004 5 37047402 to 37047418 16 + TSS region transcription start site region 46004
Tssr46005 5 37047420 to 37047457 37 + TSS region transcription start site region 46005
Tssr46006 5 37047464 to 37047488 24 + TSS region transcription start site region 46006
Tssr46007 5 37050854 to 37050865 11 + TSS region transcription start site region 46007
Tssr46008 5 37050869 to 37050892 23 + TSS region transcription start site region 46008
Tssr46009 5 37050908 to 37050922 14 + TSS region transcription start site region 46009
Gm21042 5 37057416 to 37058487 1071 - pseudogene predicted gene, 21042
Cpgi15792 5 37091013 to 37091758 745 CpG island CpG island 15792
Tssr46010 5 37091074 to 37091085 11 + TSS region transcription start site region 46010
Tssr46011 5 37091483 to 37091523 40 + TSS region transcription start site region 46011
Gm25551 5 37092258 to 37092360 102 - rRNA gene predicted gene, 25551
D5Jcs57 5 37143718 to 37143855 137 DNA segment DNA segment, Chr 5, John C. Schimenti 57
Gm1043 5 37153129 to 37234484 81355 + protein coding gene predicted gene 1043
Tssr1463 5 37154335 to 37154345 10 + TSS region transcription start site region 1463
Cpgi15793 5 37162725 to 37163837 1112 CpG island CpG island 15793