Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:36916104-37038982

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(5D5Mit73-D5Mit351)1J 5 26600987 to 37019120 10418133 chromosomal deletion deletion Chr 5, Jackson 1
Del(5D5Mit73-D5Mit351)5Jcs 5 26600987 to 37019120 10418133 chromosomal deletion deletion, Chr 5, John C. Schimenti 5
Del(5D5Mit388-D5Mit351)4Jcs 5 33318099 to 37019120 3701021 chromosomal deletion deletion, Chr 5, John C. Schimenti 4
Ppp2r2c 5 36868513 to 36955078 86565 + protein coding gene protein phosphatase 2, regulatory subunit B, gamma
Tssr45993 5 36923000 to 36923011 11 + TSS region transcription start site region 45993
Tssr45994 5 36936527 to 36936528 1 + TSS region transcription start site region 45994
Tssr45995 5 36954053 to 36954058 5 + TSS region transcription start site region 45995
Wfs1 5 36966104 to 36988982 22878 - protein coding gene wolframin ER transmembrane glycoprotein
D5Dmo1 5 36966691 to 36966851 160 DNA segment DNA segment, Chr 5, David Ornitz 1
Cpgi15790 5 36988414 to 36989456 1042 CpG island CpG island 15790
Tssr50775 5 36988922 to 36988970 48 - TSS region transcription start site region 50775
D5Mit351 5 37019013 to 37019120 107 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 351
D5Mit351.1 5 37019182 to 37019314 132 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 351.1
Cpgi15791 5 37027909 to 37029835 1926 CpG island CpG island 15791
Tssr45996 5 37028317 to 37028328 11 + TSS region transcription start site region 45996
Tssr45997 5 37028329 to 37028376 47 + TSS region transcription start site region 45997
Jakmip1 5 37028335 to 37150607 122272 + protein coding gene janus kinase and microtubule interacting protein 1
Tssr45998 5 37028458 to 37028491 33 + TSS region transcription start site region 45998
Gm26647 5 37038164 to 37041646 3482 - antisense lncRNA gene predicted gene, 26647