MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:36858513-36965078

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr45989	5	36867646 to 36867659	13	+	TSS region	transcription start site region 45989
Cpgi15788	5	36867870 to 36870624	2754		CpG island	CpG island 15788
Tssr45990	5	36868467 to 36868560	93	+	TSS region	transcription start site region 45990
Ppp2r2c	5	36868513 to 36955078	86565	+	protein coding gene	protein phosphatase 2, regulatory subunit B, gamma
Tssr45991	5	36868584 to 36868685	101	+	TSS region	transcription start site region 45991
Tssr45992	5	36868693 to 36868716	23	+	TSS region	transcription start site region 45992
Ppp2r2cos	5	36873595 to 36876879	3284	-	antisense lncRNA gene	protein phosphatase 2, regulatory subunit B, gamma, opposite strand
D5Mit230.3	5	36879934 to 36880047	113		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 230.3
D5Mit230	5	36880029 to 36880164	135		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 230
D5Jcs40	5	36883909 to 36884066	157		DNA segment	DNA segment, Chr 5, John C. Schimenti 40
D5Jcs41	5	36892986 to 36893133	147		DNA segment	DNA segment, Chr 5, John C. Schimenti 41
D5Jcs42	5	36895280 to 36895429	149		DNA segment	DNA segment, Chr 5, John C. Schimenti 42
Cpgi15789	5	36909673 to 36909940	267		CpG island	CpG island 15789
Gm42506	5	36910114 to 36910263	149	+	unclassified gene	predicted gene 42506
Tssr45993	5	36923000 to 36923011	11	+	TSS region	transcription start site region 45993
Tssr45994	5	36936527 to 36936528	1	+	TSS region	transcription start site region 45994
Tssr45995	5	36954053 to 36954058	5	+	TSS region	transcription start site region 45995