Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:36783693-36953716

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrfap1 5 36794867 to 36796754 1887 - protein coding gene Morf4 family associated protein 1
Tssr50762 5 36795835 to 36795841 6 - TSS region transcription start site region 50762
Cpgi15786 5 36795943 to 36797204 1261 CpG island CpG island 15786
Tssr45988 5 36796491 to 36796522 31 + TSS region transcription start site region 45988
Tssr50763 5 36796703 to 36796706 3 - TSS region transcription start site region 50763
Tssr50764 5 36796722 to 36796744 22 - TSS region transcription start site region 50764
Man2b2 5 36806921 to 36830653 23732 - protein coding gene mannosidase 2, alpha B2
Tssr50765 5 36807858 to 36807870 12 - TSS region transcription start site region 50765
Tssr50766 5 36815525 to 36815557 32 - TSS region transcription start site region 50766
Tssr50767 5 36816173 to 36816188 15 - TSS region transcription start site region 50767
Tssr50768 5 36821870 to 36821880 10 - TSS region transcription start site region 50768
Tssr50769 5 36825631 to 36825645 14 - TSS region transcription start site region 50769
Tssr50770 5 36826116 to 36826132 16 - TSS region transcription start site region 50770
Tssr50771 5 36827307 to 36827319 12 - TSS region transcription start site region 50771
Tssr50772 5 36827916 to 36827927 11 - TSS region transcription start site region 50772
Cpgi15787 5 36830116 to 36830879 763 CpG island CpG island 15787
Tssr50773 5 36830573 to 36830646 73 - TSS region transcription start site region 50773
Tssr50774 5 36830647 to 36830657 10 - TSS region transcription start site region 50774
Tssr45989 5 36867646 to 36867659 13 + TSS region transcription start site region 45989
Cpgi15788 5 36867870 to 36870624 2754 CpG island CpG island 15788
Tssr45990 5 36868467 to 36868560 93 + TSS region transcription start site region 45990
Ppp2r2c 5 36868513 to 36955078 86565 + protein coding gene protein phosphatase 2, regulatory subunit B, gamma
Tssr45991 5 36868584 to 36868685 101 + TSS region transcription start site region 45991
Tssr45992 5 36868693 to 36868716 23 + TSS region transcription start site region 45992
Ppp2r2cos 5 36873595 to 36876879 3284 - antisense lncRNA gene protein phosphatase 2, regulatory subunit B, gamma, opposite strand
D5Mit230.3 5 36879934 to 36880047 113 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 230.3
D5Mit230 5 36880029 to 36880164 135 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 230
D5Jcs40 5 36883909 to 36884066 157 DNA segment DNA segment, Chr 5, John C. Schimenti 40
D5Jcs41 5 36892986 to 36893133 147 DNA segment DNA segment, Chr 5, John C. Schimenti 41
D5Jcs42 5 36895280 to 36895429 149 DNA segment DNA segment, Chr 5, John C. Schimenti 42
Cpgi15789 5 36909673 to 36909940 267 CpG island CpG island 15789
Gm42506 5 36910114 to 36910263 149 + unclassified gene predicted gene 42506
Tssr45993 5 36923000 to 36923011 11 + TSS region transcription start site region 45993
Tssr45994 5 36936527 to 36936528 1 + TSS region transcription start site region 45994