Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:36394413-36535646

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sorcs2 5 36017180 to 36398139 380959 - protein coding gene sortilin-related VPS10 domain containing receptor 2
Cpgi15777 5 36397229 to 36398655 1426 CpG island CpG island 15777
Tssr50729 5 36397671 to 36397706 35 - TSS region transcription start site region 50729
Tssr50730 5 36398060 to 36398063 3 - TSS region transcription start site region 50730
Tssr50731 5 36398068 to 36398075 7 - TSS region transcription start site region 50731
Tssr50732 5 36398078 to 36398085 7 - TSS region transcription start site region 50732
Tssr50733 5 36398090 to 36398149 59 - TSS region transcription start site region 50733
D5Jcs32 5 36414526 to 36414680 154 DNA segment DNA segment, Chr 5, John C. Schimenti 32
2210406O10Rik 5 36447611 to 36464853 17242 - lincRNA gene RIKEN cDNA 2210406O10 gene
D5Mit288 5 36450901 to 36451015 114 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 288
D5Ertd521e 5 36463635 to 36463859 224 DNA segment DNA segment, Chr 5, ERATO Doi 521, expressed
Cpgi15778 5 36464413 to 36465646 1233 CpG island CpG island 15778
Tssr45982 5 36464792 to 36464797 5 + TSS region transcription start site region 45982
Tssr45983 5 36465158 to 36465196 38 + TSS region transcription start site region 45983
Grpel1 5 36465185 to 36474077 8892 + protein coding gene GrpE-like 1, mitochondrial
Tada2b 5 36473670 to 36484285 10615 - protein coding gene transcriptional adaptor 2B
Cpgi15779 5 36483299 to 36486204 2905 CpG island CpG island 15779
Tssr50734 5 36484234 to 36484302 68 - TSS region transcription start site region 50734
Tssr45984 5 36484578 to 36484620 42 + TSS region transcription start site region 45984
Ccdc96 5 36484588 to 36488171 3583 + protein coding gene coiled-coil domain containing 96
Tssr45985 5 36484623 to 36484634 11 + TSS region transcription start site region 45985
Tbc1d14 5 36490604 to 36586271 95667 - protein coding gene TBC1 domain family, member 14
Gm32528 5 36508511 to 36512447 3936 - lncRNA gene predicted gene, 32528
Tssr50735 5 36509371 to 36509380 9 - TSS region transcription start site region 50735
Cpgi15780 5 36530238 to 36530683 445 CpG island CpG island 15780
Tssr50736 5 36530489 to 36530587 98 - TSS region transcription start site region 50736
Tssr50737 5 36530610 to 36530629 19 - TSS region transcription start site region 50737