MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:3603013-3693038

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pex1	5	3596066 to 3637230	41164	+	protein coding gene	peroxisomal biogenesis factor 1
Gm43825	5	3624630 to 3625363	733	-	antisense lncRNA gene	predicted gene 43825
4833413G10Rik	5	3629777 to 3631722	1945	-	antisense lncRNA gene	RIKEN cDNA 4833413G10 gene
Gatad1	5	3639961 to 3647936	7975	-	protein coding gene	GATA zinc finger domain containing 1
Tssr49990	5	3640744 to 3640748	4	-	TSS region	transcription start site region 49990
Tssr49991	5	3641432 to 3641471	39	-	TSS region	transcription start site region 49991
Cpgi15511	5	3647155 to 3648107	952		CpG island	CpG island 15511
Tssr49992	5	3647720 to 3647733	13	-	TSS region	transcription start site region 49992
Tssr49993	5	3647838 to 3648009	171	-	TSS region	transcription start site region 49993
Tssr49994	5	3648013 to 3648038	25	-	TSS region	transcription start site region 49994
Tssr49995	5	3648045 to 3648074	29	-	TSS region	transcription start site region 49995
Gm26238	5	3652544 to 3652660	116	+	miRNA gene	predicted gene, 26238
Tmbim7	5	3657004 to 3679865	22861	+	protein coding gene	transmembrane BAX inhibitor motif containing 7
Tssr49996	5	3657164 to 3657177	13	-	TSS region	transcription start site region 49996
Tssr45063	5	3657172 to 3657186	14	+	TSS region	transcription start site region 45063
Tssr45064	5	3657187 to 3657205	18	+	TSS region	transcription start site region 45064
Tssr45065	5	3657212 to 3657217	5	+	TSS region	transcription start site region 45065
Ankib1	5	3690000 to 3802925	112925	-	protein coding gene	ankyrin repeat and IBR domain containing 1