Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:3534670-3574684

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15509 5 3543564 to 3544433 869 CpG island CpG island 15509
Tssr45051 5 3543812 to 3543853 41 + TSS region transcription start site region 45051
Fam133b 5 3543833 to 3570238 26405 + protein coding gene family with sequence similarity 133, member B
Tssr45052 5 3543862 to 3543884 22 + TSS region transcription start site region 45052
Gm43017 5 3544037 to 3544788 751 + sense intronic lncRNA gene predicted gene 43017
Tssr45053 5 3544082 to 3544112 30 + TSS region transcription start site region 45053
Tssr45054 5 3554670 to 3554684 14 + TSS region transcription start site region 45054
Tssr45055 5 3557740 to 3557753 13 + TSS region transcription start site region 45055
n-R5s169 5 3561154 to 3561273 119 + rRNA gene nuclear encoded rRNA 5S 169
Tssr1413 5 3571560 to 3571564 4 + TSS region transcription start site region 1413
Tssr45056 5 3571572 to 3571580 8 + TSS region transcription start site region 45056
Tssr45057 5 3571590 to 3571610 20 + TSS region transcription start site region 45057
Tssr45058 5 3571664 to 3571671 7 + TSS region transcription start site region 45058
Tssr45059 5 3571676 to 3571692 16 + TSS region transcription start site region 45059
1700109H08Rik 5 3571716 to 3584341 12625 + protein coding gene RIKEN cDNA 1700109H08 gene
4833441D16Rik 5 3573053 to 3573546 493 unclassified gene RIKEN cDNA 4833441D16 gene