Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:35046295-35286313

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hgfac 5 35041509 to 35048461 6952 + protein coding gene hepatocyte growth factor activator
Tssr45930 5 35046483 to 35046493 10 + TSS region transcription start site region 45930
Cpgi15761 5 35056261 to 35057755 1494 CpG island CpG island 15761
Dok7 5 35056766 to 35087839 31073 + protein coding gene docking protein 7
Tssr45931 5 35056850 to 35056895 45 + TSS region transcription start site region 45931
Tssr45932 5 35057059 to 35057096 37 + TSS region transcription start site region 45932
D5Mit420a 5 35065210 to 35065331 121 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 420a
D5Mit420b 5 35065210 to 35065354 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 420b
Lrpap1 5 35091506 to 35105697 14191 - protein coding gene low density lipoprotein receptor-related protein associated protein 1
Tssr50683 5 35093105 to 35093122 17 - TSS region transcription start site region 50683
Tssr50684 5 35094907 to 35094918 11 - TSS region transcription start site region 50684
Tssr50685 5 35094980 to 35094996 16 - TSS region transcription start site region 50685
Tssr50686 5 35096018 to 35096029 11 - TSS region transcription start site region 50686
Tssr45933 5 35098147 to 35098167 20 + TSS region transcription start site region 45933
Tssr50687 5 35102421 to 35102432 11 - TSS region transcription start site region 50687
Tssr50688 5 35102503 to 35102520 17 - TSS region transcription start site region 50688
Cpgi15762 5 35105321 to 35106031 710 CpG island CpG island 15762
Tssr50689 5 35105691 to 35105720 29 - TSS region transcription start site region 50689
D5Jcs87 5 35119222 to 35119378 156 DNA segment DNA segment, Chr 5, John C. Schimenti 87
D5Jcs88 5 35126558 to 35126716 158 DNA segment DNA segment, Chr 5, John C. Schimenti 88
Cpgi15763 5 35129228 to 35129452 224 CpG island CpG island 15763
Gm31601 5 35159897 to 35161341 1444 - lncRNA gene predicted gene, 31601
D5Mit268 5 35162921 to 35163081 160 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 268
Tgfbm1 5 35162921 to 35163081 160 QTL transforming growth factor beta, modifier 1
Tssr45934 5 35166295 to 35166313 18 + TSS region transcription start site region 45934
Tssr45935 5 35166379 to 35166393 14 + TSS region transcription start site region 45935
Tssr45936 5 35166434 to 35166445 11 + TSS region transcription start site region 45936
Tssr45937 5 35166503 to 35166525 22 + TSS region transcription start site region 45937
Tssr45938 5 35200328 to 35200331 3 + TSS region transcription start site region 45938
Gm40281 5 35229668 to 35266232 36564 + lncRNA gene predicted gene, 40281
Cpgi15764 5 35278411 to 35281507 3096 CpG island CpG island 15764
Adra2c 5 35278566 to 35281763 3197 + protein coding gene adrenergic receptor, alpha 2c
Tssr45939 5 35278911 to 35278926 15 + TSS region transcription start site region 45939
Tssr45940 5 35279185 to 35279218 33 + TSS region transcription start site region 45940