Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Msantd1 | 5 | 13420 | + | protein coding gene | Myb/SANT-like DNA-binding domain containing 1 | |
Tssr45908 | 5 | 27 | + | TSS region | transcription start site region 45908 | |
D5Jcs85 | 5 | 157 | DNA segment | DNA segment, Chr 5, John C. Schimenti 85 | ||
D5Jcs86 | 5 | 163 | DNA segment | DNA segment, Chr 5, John C. Schimenti 86 | ||
Tssr50682 | 5 | 3 | - | TSS region | transcription start site region 50682 | |
Cpgi15760 | 5 | 1450 | CpG island | CpG island 15760 | ||
Tssr45909 | 5 | 5 | + | TSS region | transcription start site region 45909 | |
Tssr45910 | 5 | 69 | + | TSS region | transcription start site region 45910 | |
Rgs12 | 5 | 90199 | + | protein coding gene | regulator of G-protein signaling 12 | |
Tssr45911 | 5 | 11 | + | TSS region | transcription start site region 45911 | |
Tssr45912 | 5 | 18 | + | TSS region | transcription start site region 45912 | |
Tssr45913 | 5 | 41 | + | TSS region | transcription start site region 45913 | |
Tssr45914 | 5 | 12 | + | TSS region | transcription start site region 45914 | |
Tssr45915 | 5 | 20 | + | TSS region | transcription start site region 45915 | |
Tssr45916 | 5 | 9 | + | TSS region | transcription start site region 45916 | |
Tssr45917 | 5 | 45 | + | TSS region | transcription start site region 45917 | |
Tssr45918 | 5 | 22 | + | TSS region | transcription start site region 45918 | |
Tssr45919 | 5 | 50 | + | TSS region | transcription start site region 45919 | |
Tssr45920 | 5 | 23 | + | TSS region | transcription start site region 45920 | |
Tssr45921 | 5 | 16 | + | TSS region | transcription start site region 45921 | |
Tssr45922 | 5 | 6 | + | TSS region | transcription start site region 45922 | |
Mir3097 | 5 | 66 | + | miRNA gene | microRNA 3097 | |
Gm43791 | 5 | 1575 | - | antisense lncRNA gene | predicted gene 43791 | |
Hgfac | 5 | 6952 | + | protein coding gene | hepatocyte growth factor activator | |
Tssr45923 | 5 | 56 | + | TSS region | transcription start site region 45923 | |
Tssr45924 | 5 | 31 | + | TSS region | transcription start site region 45924 | |
Tssr45925 | 5 | 47 | + | TSS region | transcription start site region 45925 | |
Tssr45926 | 5 | 14 | + | TSS region | transcription start site region 45926 | |
Tssr45927 | 5 | 14 | + | TSS region | transcription start site region 45927 | |
Tssr45928 | 5 | 8 | + | TSS region | transcription start site region 45928 | |
Tssr45929 | 5 | 10 | + | TSS region | transcription start site region 45929 | |
Tssr45930 | 5 | 10 | + | TSS region | transcription start site region 45930 | |
Cpgi15761 | 5 | 1494 | CpG island | CpG island 15761 | ||
Dok7 | 5 | 31073 | + | protein coding gene | docking protein 7 | |
Tssr45931 | 5 | 45 | + | TSS region | transcription start site region 45931 | |
Tssr45932 | 5 | 37 | + | TSS region | transcription start site region 45932 | |
D5Mit420b | 5 | 144 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 420b | ||
D5Mit420a | 5 | 121 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 420a | ||
Lrpap1 | 5 | 14191 | - | protein coding gene | low density lipoprotein receptor-related protein associated protein 1 | |
Tssr50683 | 5 | 17 | - | TSS region | transcription start site region 50683 | |
Tssr50684 | 5 | 11 | - | TSS region | transcription start site region 50684 | |
Tssr50685 | 5 | 16 | - | TSS region | transcription start site region 50685 | |
Tssr50686 | 5 | 11 | - | TSS region | transcription start site region 50686 | |
Tssr45933 | 5 | 20 | + | TSS region | transcription start site region 45933 | |
Tssr50687 | 5 | 11 | - | TSS region | transcription start site region 50687 | |
Tssr50688 | 5 | 17 | - | TSS region | transcription start site region 50688 | |
Cpgi15762 | 5 | 710 | CpG island | CpG island 15762 | ||
Tssr50689 | 5 | 29 | - | TSS region | transcription start site region 50689 | |
D5Jcs87 | 5 | 156 | DNA segment | DNA segment, Chr 5, John C. Schimenti 87 | ||
D5Jcs88 | 5 | 158 | DNA segment | DNA segment, Chr 5, John C. Schimenti 88 | ||
Cpgi15763 | 5 | 224 | CpG island | CpG island 15763 | ||
Gm31601 | 5 | 1444 | - | lncRNA gene | predicted gene, 31601 | |
D5Mit268 | 5 | 160 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 268 | ||
Tgfbm1 | 5 | 160 | QTL | transforming growth factor beta, modifier 1 | ||
Tssr45934 | 5 | 18 | + | TSS region | transcription start site region 45934 | |
Tssr45935 | 5 | 14 | + | TSS region | transcription start site region 45935 | |
Tssr45936 | 5 | 11 | + | TSS region | transcription start site region 45936 | |
Tssr45937 | 5 | 22 | + | TSS region | transcription start site region 45937 | |
Tssr45938 | 5 | 3 | + | TSS region | transcription start site region 45938 | |
Gm40281 | 5 | 36564 | + | lncRNA gene | predicted gene, 40281 | |
Cpgi15764 | 5 | 3096 | CpG island | CpG island 15764 | ||
Adra2c | 5 | 3197 | + | protein coding gene | adrenergic receptor, alpha 2c | |
Tssr45939 | 5 | 15 | + | TSS region | transcription start site region 45939 | |
Tssr45940 | 5 | 33 | + | TSS region | transcription start site region 45940 | |
D5Jcs37 | 5 | 149 | DNA segment | DNA segment, Chr 5, John C. Schimenti 37 | ||
Gm31656 | 5 | 27803 | + | lncRNA gene | predicted gene, 31656 | |
Tssr45941 | 5 | 16 | + | TSS region | transcription start site region 45941 | |
4930478P22Rik | 5 | 6124 | + | lincRNA gene | RIKEN cDNA 4930478P22 gene | |
D5Jcs38 | 5 | 149 | DNA segment | DNA segment, Chr 5, John C. Schimenti 38 | ||
E130018O15Rik | 5 | 9324 | - | lincRNA gene | RIKEN cDNA E130018O15 gene | |
Cpgi15765 | 5 | 2004 | CpG island | CpG island 15765 | ||
Tssr45942 | 5 | 38 | + | TSS region | transcription start site region 45942 | |
Tssr45943 | 5 | 5 | + | TSS region | transcription start site region 45943 | |
Tssr45944 | 5 | 11 | + | TSS region | transcription start site region 45944 | |
Tssr45945 | 5 | 13 | + | TSS region | transcription start site region 45945 | |
Hmx1 | 5 | 10622 | + | protein coding gene | H6 homeobox 1 | |
4930442P19Rik | 5 | 1239 | - | unclassified gene | RIKEN cDNA 4930442P19 gene | |
Cpgi15766 | 5 | 2083 | CpG island | CpG island 15766 | ||
Tssr50690 | 5 | 12 | - | TSS region | transcription start site region 50690 | |
Tssr45946 | 5 | 4 | + | TSS region | transcription start site region 45946 | |
Tssr45947 | 5 | 6 | + | TSS region | transcription start site region 45947 | |
Gm43377 | 5 | 454 | + | unclassified gene | predicted gene 43377 | |
Cpgi15767 | 5 | 1402 | CpG island | CpG island 15767 | ||
Cpgi15768 | 5 | 586 | CpG island | CpG island 15768 | ||
Tssr50691 | 5 | 9 | - | TSS region | transcription start site region 50691 | |
Tssr50692 | 5 | 8 | - | TSS region | transcription start site region 50692 | |
D5Jcs49 | 5 | 158 | DNA segment | DNA segment, Chr 5, John C. Schimenti 49 | ||
Gm40283 | 5 | 10339 | + | lncRNA gene | predicted gene, 40283 | |
Tssr45948 | 5 | 27 | + | TSS region | transcription start site region 45948 | |
Cpgi15769 | 5 | 180 | CpG island | CpG island 15769 | ||
D5Mit126 | 5 | 111 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 126 | ||
Cpz | 5 | 23408 | - | protein coding gene | carboxypeptidase Z | |
Irm2 | 5 | 0 | QTL | inflammatory response modulator 2 | ||
Cpgi15770 | 5 | 647 | CpG island | CpG island 15770 | ||
Tssr50693 | 5 | 24 | - | TSS region | transcription start site region 50693 | |
Tssr50694 | 5 | 50 | - | TSS region | transcription start site region 50694 | |
Tssr50695 | 5 | 14 | - | TSS region | transcription start site region 50695 | |
Cpgi15771 | 5 | 185 | CpG island | CpG island 15771 | ||
D5Jcs50 | 5 | 154 | DNA segment | DNA segment, Chr 5, John C. Schimenti 50 | ||
Gm43860 | 5 | 2704 | - | unclassified gene | predicted gene 43860 | |
Plk-ps1 | 5 | 1786 | + | pseudogene | polo like kinase, pseudogene 1 | |
Trmt44 | 5 | 18862 | - | protein coding gene | tRNA methyltransferase 44 | |
Cpgi15772 | 5 | 766 | CpG island | CpG island 15772 | ||
Tssr50696 | 5 | 37 | - | TSS region | transcription start site region 50696 | |
Tssr45949 | 5 | 34 | + | TSS region | transcription start site region 45949 | |
D5Mit4 | 5 | 197 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 4 | ||
4931431C16Rik | 5 | 7536 | - | antisense lncRNA gene | RIKEN cDNA 4931431C16 gene | |
Cpgi15773 | 5 | 761 | CpG island | CpG island 15773 | ||
Acox3 | 5 | 31244 | + | protein coding gene | acyl-Coenzyme A oxidase 3, pristanoyl | |
Tssr45950 | 5 | 92 | + | TSS region | transcription start site region 45950 | |
Tssr45951 | 5 | 22 | + | TSS region | transcription start site region 45951 | |
Tssr45952 | 5 | 24 | + | TSS region | transcription start site region 45952 | |
Tssr45953 | 5 | 1 | + | TSS region | transcription start site region 45953 | |
Tssr45954 | 5 | 2 | + | TSS region | transcription start site region 45954 | |
Tssr45955 | 5 | 11 | + | TSS region | transcription start site region 45955 | |
Tssr45956 | 5 | 12 | + | TSS region | transcription start site region 45956 | |
D5Mit352 | 5 | 109 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 352 | ||
D5Jcs51 | 5 | 158 | DNA segment | DNA segment, Chr 5, John C. Schimenti 51 | ||
rs | 5 | -65535033 | heritable phenotypic marker | recessive spotting |