MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:34727492-34927499

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(5Letm1-Htt)1Jcs	5	33739675 to 34912534	1172859		chromosomal deletion	deletion, Chr 5, John C Schimenti
Grk4	5	34660379 to 34755305	94926	+	protein coding gene	G protein-coupled receptor kinase 4
Mir467g	5	34732853 to 34732972	119	-	miRNA gene	microRNA 467g
Cpgi15759	5	34761207 to 34762578	1371		CpG island	CpG island 15759
Tssr45900	5	34761646 to 34761660	14	+	TSS region	transcription start site region 45900
Tssr45901	5	34761734 to 34761780	46	+	TSS region	transcription start site region 45901
Htt	5	34761740 to 34912534	150794	+	protein coding gene	huntingtin
Tssr45902	5	34761815 to 34761826	11	+	TSS region	transcription start site region 45902
D5Jcs84	5	34790162 to 34790306	144		DNA segment	DNA segment, Chr 5, John C. Schimenti 84
D5Jcs83	5	34790170 to 34790324	154		DNA segment	DNA segment, Chr 5, John C. Schimenti 83
Tssr45903	5	34801360 to 34801383	23	+	TSS region	transcription start site region 45903
Tssr45904	5	34821142 to 34821146	4	+	TSS region	transcription start site region 45904
Tssr45905	5	34827492 to 34827499	7	+	TSS region	transcription start site region 45905
Tssr45906	5	34865744 to 34865766	22	+	TSS region	transcription start site region 45906
Tssr45907	5	34898692 to 34898698	6	+	TSS region	transcription start site region 45907
Msantd1	5	34913571 to 34926991	13420	+	protein coding gene	Myb/SANT-like DNA-binding domain containing 1
Tssr45908	5	34917518 to 34917545	27	+	TSS region	transcription start site region 45908
D5Jcs85	5	34922747 to 34922904	157		DNA segment	DNA segment, Chr 5, John C. Schimenti 85