Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(5Letm1-Htt)1Jcs | 5 | 1172859 | chromosomal deletion | deletion, Chr 5, John C Schimenti | ||
Sh3bp2 | 5 | 37803 | + | protein coding gene | SH3-domain binding protein 2 | |
D5Jcs82 | 5 | 165 | DNA segment | DNA segment, Chr 5, John C. Schimenti 82 | ||
Tssr45888 | 5 | 14 | + | TSS region | transcription start site region 45888 | |
Tssr45889 | 5 | 31 | + | TSS region | transcription start site region 45889 | |
Tssr45890 | 5 | 35 | + | TSS region | transcription start site region 45890 | |
Cpgi15756 | 5 | 1111 | CpG island | CpG island 15756 | ||
Tssr45891 | 5 | 43 | + | TSS region | transcription start site region 45891 | |
Add1 | 5 | 58591 | + | protein coding gene | adducin 1 (alpha) | |
Tssr45892 | 5 | 48 | + | TSS region | transcription start site region 45892 | |
Tssr45893 | 5 | 67 | + | TSS region | transcription start site region 45893 | |
Tssr45894 | 5 | 5 | + | TSS region | transcription start site region 45894 | |
Mir7036b | 5 | 62 | + | miRNA gene | microRNA 7036b | |
Gm42867 | 5 | 468 | + | unclassified gene | predicted gene 42867 | |
Tssr45895 | 5 | 4 | + | TSS region | transcription start site region 45895 | |
Mfsd10 | 5 | 3565 | - | protein coding gene | major facilitator superfamily domain containing 10 | |
Tssr50667 | 5 | 23 | - | TSS region | transcription start site region 50667 | |
Tssr50668 | 5 | 27 | - | TSS region | transcription start site region 50668 | |
Tssr50669 | 5 | 48 | - | TSS region | transcription start site region 50669 | |
Tssr50670 | 5 | 5 | - | TSS region | transcription start site region 50670 | |
Tssr50671 | 5 | 12 | - | TSS region | transcription start site region 50671 | |
Cpgi15757 | 5 | 884 | CpG island | CpG island 15757 | ||
Tssr50672 | 5 | 51 | - | TSS region | transcription start site region 50672 | |
Tssr50673 | 5 | 18 | - | TSS region | transcription start site region 50673 | |
Tssr50674 | 5 | 14 | - | TSS region | transcription start site region 50674 | |
Tssr50675 | 5 | 93 | - | TSS region | transcription start site region 50675 | |
Tssr50676 | 5 | 13 | - | TSS region | transcription start site region 50676 | |
Nop14 | 5 | 21612 | - | protein coding gene | NOP14 nucleolar protein | |
Tssr50677 | 5 | 10 | - | TSS region | transcription start site region 50677 | |
Tssr45896 | 5 | 36 | + | TSS region | transcription start site region 45896 | |
Gm15522 | 5 | 1759 | + | antisense lncRNA gene | predicted gene 15522 | |
Tssr50678 | 5 | 11 | - | TSS region | transcription start site region 50678 | |
Tssr50679 | 5 | 49 | - | TSS region | transcription start site region 50679 | |
Cpgi15758 | 5 | 1404 | CpG island | CpG island 15758 | ||
Tssr50680 | 5 | 70 | - | TSS region | transcription start site region 50680 | |
Tssr45897 | 5 | 8 | + | TSS region | transcription start site region 45897 | |
Tssr45898 | 5 | 14 | + | TSS region | transcription start site region 45898 | |
Tssr45899 | 5 | 50 | + | TSS region | transcription start site region 45899 | |
Grk4 | 5 | 94926 | + | protein coding gene | G protein-coupled receptor kinase 4 | |
Tssr50681 | 5 | 31 | - | TSS region | transcription start site region 50681 | |
Gm42560 | 5 | 27308 | - | antisense lncRNA gene | predicted gene 42560 | |
Mir467g | 5 | 119 | - | miRNA gene | microRNA 467g | |
Cpgi15759 | 5 | 1371 | CpG island | CpG island 15759 | ||
Tssr45900 | 5 | 14 | + | TSS region | transcription start site region 45900 | |
Tssr45901 | 5 | 46 | + | TSS region | transcription start site region 45901 | |
Htt | 5 | 150794 | + | protein coding gene | huntingtin | |
Tssr45902 | 5 | 11 | + | TSS region | transcription start site region 45902 | |
D5Jcs84 | 5 | 144 | DNA segment | DNA segment, Chr 5, John C. Schimenti 84 | ||
D5Jcs83 | 5 | 154 | DNA segment | DNA segment, Chr 5, John C. Schimenti 83 | ||
Tssr45903 | 5 | 23 | + | TSS region | transcription start site region 45903 | |
Tssr45904 | 5 | 4 | + | TSS region | transcription start site region 45904 | |
Tssr45905 | 5 | 7 | + | TSS region | transcription start site region 45905 | |
Tssr45906 | 5 | 22 | + | TSS region | transcription start site region 45906 | |
Tssr45907 | 5 | 6 | + | TSS region | transcription start site region 45907 | |
Msantd1 | 5 | 13420 | + | protein coding gene | Myb/SANT-like DNA-binding domain containing 1 | |
Tssr45908 | 5 | 27 | + | TSS region | transcription start site region 45908 | |
D5Jcs85 | 5 | 157 | DNA segment | DNA segment, Chr 5, John C. Schimenti 85 | ||
D5Jcs86 | 5 | 163 | DNA segment | DNA segment, Chr 5, John C. Schimenti 86 | ||
Tssr50682 | 5 | 3 | - | TSS region | transcription start site region 50682 | |
Cpgi15760 | 5 | 1450 | CpG island | CpG island 15760 | ||
Tssr45909 | 5 | 5 | + | TSS region | transcription start site region 45909 | |
Tssr45910 | 5 | 69 | + | TSS region | transcription start site region 45910 | |
Rgs12 | 5 | 90199 | + | protein coding gene | regulator of G-protein signaling 12 | |
Tssr45911 | 5 | 11 | + | TSS region | transcription start site region 45911 | |
Tssr45912 | 5 | 18 | + | TSS region | transcription start site region 45912 | |
Tssr45913 | 5 | 41 | + | TSS region | transcription start site region 45913 | |
Tssr45914 | 5 | 12 | + | TSS region | transcription start site region 45914 | |
Tssr45915 | 5 | 20 | + | TSS region | transcription start site region 45915 | |
Tssr45916 | 5 | 9 | + | TSS region | transcription start site region 45916 | |
Tssr45917 | 5 | 45 | + | TSS region | transcription start site region 45917 | |
Tssr45918 | 5 | 22 | + | TSS region | transcription start site region 45918 | |
Tssr45919 | 5 | 50 | + | TSS region | transcription start site region 45919 | |
Tssr45920 | 5 | 23 | + | TSS region | transcription start site region 45920 | |
Tssr45921 | 5 | 16 | + | TSS region | transcription start site region 45921 | |
Tssr45922 | 5 | 6 | + | TSS region | transcription start site region 45922 | |
Mir3097 | 5 | 66 | + | miRNA gene | microRNA 3097 | |
Gm43791 | 5 | 1575 | - | antisense lncRNA gene | predicted gene 43791 | |
Hgfac | 5 | 6952 | + | protein coding gene | hepatocyte growth factor activator | |
Tssr45923 | 5 | 56 | + | TSS region | transcription start site region 45923 | |
Tssr45924 | 5 | 31 | + | TSS region | transcription start site region 45924 | |
Tssr45925 | 5 | 47 | + | TSS region | transcription start site region 45925 | |
Tssr45926 | 5 | 14 | + | TSS region | transcription start site region 45926 | |
Tssr45927 | 5 | 14 | + | TSS region | transcription start site region 45927 | |
Tssr45928 | 5 | 8 | + | TSS region | transcription start site region 45928 | |
Tssr45929 | 5 | 10 | + | TSS region | transcription start site region 45929 | |
Tssr45930 | 5 | 10 | + | TSS region | transcription start site region 45930 | |
Cpgi15761 | 5 | 1494 | CpG island | CpG island 15761 | ||
Dok7 | 5 | 31073 | + | protein coding gene | docking protein 7 | |
Tssr45931 | 5 | 45 | + | TSS region | transcription start site region 45931 | |
Tssr45932 | 5 | 37 | + | TSS region | transcription start site region 45932 | |
D5Mit420a | 5 | 121 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 420a | ||
D5Mit420b | 5 | 144 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 420b | ||
Lrpap1 | 5 | 14191 | - | protein coding gene | low density lipoprotein receptor-related protein associated protein 1 | |
Tssr50683 | 5 | 17 | - | TSS region | transcription start site region 50683 | |
Tssr50684 | 5 | 11 | - | TSS region | transcription start site region 50684 | |
Tssr50685 | 5 | 16 | - | TSS region | transcription start site region 50685 | |
Tssr50686 | 5 | 11 | - | TSS region | transcription start site region 50686 | |
Tssr45933 | 5 | 20 | + | TSS region | transcription start site region 45933 | |
Tssr50687 | 5 | 11 | - | TSS region | transcription start site region 50687 | |
Tssr50688 | 5 | 17 | - | TSS region | transcription start site region 50688 | |
Cpgi15762 | 5 | 710 | CpG island | CpG island 15762 | ||
Tssr50689 | 5 | 29 | - | TSS region | transcription start site region 50689 | |
D5Jcs87 | 5 | 156 | DNA segment | DNA segment, Chr 5, John C. Schimenti 87 | ||
D5Jcs88 | 5 | 158 | DNA segment | DNA segment, Chr 5, John C. Schimenti 88 | ||
Cpgi15763 | 5 | 224 | CpG island | CpG island 15763 | ||
Gm31601 | 5 | 1444 | - | lncRNA gene | predicted gene, 31601 | |
D5Mit268 | 5 | 160 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 268 | ||
Tgfbm1 | 5 | 160 | QTL | transforming growth factor beta, modifier 1 | ||
Tssr45934 | 5 | 18 | + | TSS region | transcription start site region 45934 | |
Tssr45935 | 5 | 14 | + | TSS region | transcription start site region 45935 | |
Tssr45936 | 5 | 11 | + | TSS region | transcription start site region 45936 | |
Tssr45937 | 5 | 22 | + | TSS region | transcription start site region 45937 | |
Tssr45938 | 5 | 3 | + | TSS region | transcription start site region 45938 | |
Gm40281 | 5 | 36564 | + | lncRNA gene | predicted gene, 40281 | |
Cpgi15764 | 5 | 3096 | CpG island | CpG island 15764 | ||
Adra2c | 5 | 3197 | + | protein coding gene | adrenergic receptor, alpha 2c | |
Tssr45939 | 5 | 15 | + | TSS region | transcription start site region 45939 | |
Tssr45940 | 5 | 33 | + | TSS region | transcription start site region 45940 | |
D5Jcs37 | 5 | 149 | DNA segment | DNA segment, Chr 5, John C. Schimenti 37 | ||
Gm31656 | 5 | 27803 | + | lncRNA gene | predicted gene, 31656 | |
Tssr45941 | 5 | 16 | + | TSS region | transcription start site region 45941 | |
4930478P22Rik | 5 | 6124 | + | lincRNA gene | RIKEN cDNA 4930478P22 gene | |
D5Jcs38 | 5 | 149 | DNA segment | DNA segment, Chr 5, John C. Schimenti 38 | ||
E130018O15Rik | 5 | 9324 | - | lincRNA gene | RIKEN cDNA E130018O15 gene | |
Cpgi15765 | 5 | 2004 | CpG island | CpG island 15765 | ||
Tssr45942 | 5 | 38 | + | TSS region | transcription start site region 45942 | |
Tssr45943 | 5 | 5 | + | TSS region | transcription start site region 45943 | |
Tssr45944 | 5 | 11 | + | TSS region | transcription start site region 45944 | |
Tssr45945 | 5 | 13 | + | TSS region | transcription start site region 45945 | |
Hmx1 | 5 | 10622 | + | protein coding gene | H6 homeobox 1 | |
4930442P19Rik | 5 | 1239 | - | unclassified gene | RIKEN cDNA 4930442P19 gene | |
Cpgi15766 | 5 | 2083 | CpG island | CpG island 15766 | ||
Tssr50690 | 5 | 12 | - | TSS region | transcription start site region 50690 | |
Tssr45946 | 5 | 4 | + | TSS region | transcription start site region 45946 | |
Tssr45947 | 5 | 6 | + | TSS region | transcription start site region 45947 | |
Gm43377 | 5 | 454 | + | unclassified gene | predicted gene 43377 | |
Cpgi15767 | 5 | 1402 | CpG island | CpG island 15767 | ||
Cpgi15768 | 5 | 586 | CpG island | CpG island 15768 | ||
Tssr50691 | 5 | 9 | - | TSS region | transcription start site region 50691 | |
Tssr50692 | 5 | 8 | - | TSS region | transcription start site region 50692 |