Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:34458661-34558821

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam193a 5 34369933 to 34486456 116523 + protein coding gene family with sequence homology 193, member A
Tssr45875 5 34462176 to 34462179 3 + TSS region transcription start site region 45875
Tssr45876 5 34462184 to 34462195 11 + TSS region transcription start site region 45876
Gm42559 5 34469664 to 34473195 3531 + unclassified gene predicted gene 42559
Gm26931 5 34481914 to 34482522 608 - pseudogene predicted gene, 26931
Gm43457 5 34487314 to 34489722 2408 + unclassified gene predicted gene 43457
Tssr50661 5 34495290 to 34495335 45 - TSS region transcription start site region 50661
Tnip2 5 34496096 to 34513979 17883 - protein coding gene TNFAIP3 interacting protein 2
Tssr50662 5 34500832 to 34500835 3 - TSS region transcription start site region 50662
Tssr50663 5 34504460 to 34504464 4 - TSS region transcription start site region 50663
D5Jcs81 5 34508661 to 34508821 160 DNA segment DNA segment, Chr 5, John C. Schimenti 81
Cpgi15753 5 34513271 to 34514163 892 CpG island CpG island 15753
Tssr50664 5 34513703 to 34513714 11 - TSS region transcription start site region 50664
Tssr50665 5 34513892 to 34513984 92 - TSS region transcription start site region 50665
Cpgi15754 5 34525701 to 34526191 490 CpG island CpG island 15754
Tssr45877 5 34525777 to 34525788 11 + TSS region transcription start site region 45877
Tssr45878 5 34525797 to 34525869 72 + TSS region transcription start site region 45878
Sh3bp2 5 34525838 to 34563641 37803 + protein coding gene SH3-domain binding protein 2
Tssr50666 5 34526160 to 34526165 5 - TSS region transcription start site region 50666
Tssr45879 5 34530648 to 34530651 3 + TSS region transcription start site region 45879
Gm22847 5 34530649 to 34530753 104 + snRNA gene predicted gene, 22847
Tssr45880 5 34531963 to 34531984 21 + TSS region transcription start site region 45880
Tssr45881 5 34536127 to 34536176 49 + TSS region transcription start site region 45881
Tssr45882 5 34543377 to 34543429 52 + TSS region transcription start site region 45882
Tssr45883 5 34543431 to 34543442 11 + TSS region transcription start site region 45883
Tssr45884 5 34547844 to 34547845 1 + TSS region transcription start site region 45884
Cpgi15755 5 34549384 to 34550224 840 CpG island CpG island 15755
Tssr45885 5 34549544 to 34549552 8 + TSS region transcription start site region 45885
Tssr45886 5 34549568 to 34549581 13 + TSS region transcription start site region 45886
Tssr45887 5 34549595 to 34549631 36 + TSS region transcription start site region 45887
D5Jcs82 5 34550205 to 34550370 165 DNA segment DNA segment, Chr 5, John C. Schimenti 82
Tssr45888 5 34557310 to 34557324 14 + TSS region transcription start site region 45888