Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:34281952-34391959

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfyve28 5 34194893 to 34288449 93556 - protein coding gene zinc finger, FYVE domain containing 28
Cpgi15749 5 34286971 to 34289134 2163 CpG island CpG island 15749
Tssr50653 5 34288286 to 34288305 19 - TSS region transcription start site region 50653
Tssr50654 5 34288318 to 34288372 54 - TSS region transcription start site region 50654
Tssr50655 5 34288375 to 34288399 24 - TSS region transcription start site region 50655
Tssr50656 5 34288407 to 34288469 62 - TSS region transcription start site region 50656
Cfap99 5 34288600 to 34327327 38727 + protein coding gene cilia and flagella associated protein 99
Tssr45864 5 34288644 to 34288670 26 + TSS region transcription start site region 45864
Tssr45865 5 34288683 to 34288694 11 + TSS region transcription start site region 45865
Gm5553 5 34306343 to 34307866 1523 - pseudogene predicted gene 5553
Gm43105 5 34306718 to 34307176 458 - pseudogene predicted gene 43105
Gm43458 5 34309212 to 34327530 18318 - lincRNA gene predicted gene 43458
D5Jcs36 5 34324378 to 34324525 147 DNA segment DNA segment, Chr 5, John C. Schimenti 36
Cpgi15750 5 34326880 to 34327381 501 CpG island CpG island 15750
A830049F12Rik 5 34335123 to 34337181 2058 unclassified non-coding RNA gene RIKEN cDNA A830049F12 gene
Cpgi15751 5 34335723 to 34337253 1530 CpG island CpG island 15751
Tssr50657 5 34336134 to 34336161 27 - TSS region transcription start site region 50657
Tssr50658 5 34336170 to 34336224 54 - TSS region transcription start site region 50658
Rnf4 5 34336250 to 34353445 17195 + protein coding gene ring finger protein 4
Tssr45866 5 34336384 to 34336395 11 + TSS region transcription start site region 45866
Tssr45867 5 34336401 to 34336459 58 + TSS region transcription start site region 45867
Tssr50659 5 34336818 to 34336832 14 - TSS region transcription start site region 50659
Tssr50660 5 34336872 to 34336892 20 - TSS region transcription start site region 50660
Tssr45868 5 34336928 to 34336937 9 + TSS region transcription start site region 45868
Tssr45869 5 34336952 to 34336959 7 + TSS region transcription start site region 45869
Tssr45870 5 34336964 to 34337016 52 + TSS region transcription start site region 45870
Tssr45871 5 34352083 to 34352112 29 + TSS region transcription start site region 45871
Tssr45872 5 34363379 to 34363380 1 + TSS region transcription start site region 45872
Cpgi15752 5 34369338 to 34370837 1499 CpG island CpG island 15752
Tssr45873 5 34369894 to 34369905 11 + TSS region transcription start site region 45873
Tssr45874 5 34369909 to 34369970 61 + TSS region transcription start site region 45874
Fam193a 5 34369933 to 34486456 116523 + protein coding gene family with sequence homology 193, member A