Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Slbp | 5 | 12519 | - | protein coding gene | stem-loop binding protein | |
Cpgi15738 | 5 | 1207 | CpG island | CpG island 15738 | ||
Gm10459 | 5 | 1154 | + | unclassified gene | predicted gene 10459 | |
Tssr50611 | 5 | 15 | - | TSS region | transcription start site region 50611 | |
Tssr50612 | 5 | 17 | - | TSS region | transcription start site region 50612 | |
Tssr50613 | 5 | 59 | - | TSS region | transcription start site region 50613 | |
Tmem129 | 5 | 4695 | - | protein coding gene | transmembrane protein 129 | |
Tssr50614 | 5 | 15 | - | TSS region | transcription start site region 50614 | |
Cpgi15739 | 5 | 1842 | CpG island | CpG island 15739 | ||
Tssr50615 | 5 | 29 | - | TSS region | transcription start site region 50615 | |
Tssr50616 | 5 | 50 | - | TSS region | transcription start site region 50616 | |
Tssr50617 | 5 | 51 | - | TSS region | transcription start site region 50617 | |
Tssr45826 | 5 | 37 | + | TSS region | transcription start site region 45826 | |
Tacc3 | 5 | 14075 | + | protein coding gene | transforming, acidic coiled-coil containing protein 3 | |
Tssr45827 | 5 | 13 | + | TSS region | transcription start site region 45827 | |
Tssr45828 | 5 | 49 | + | TSS region | transcription start site region 45828 | |
Gm42965 | 5 | 249 | - | pseudogene | predicted gene 42965 | |
Cpgi15740 | 5 | 1250 | CpG island | CpG island 15740 | ||
G630022F23Rik | 5 | 3626 | - | unclassified gene | RIKEN cDNA G630022F23 gene | |
Tssr45829 | 5 | 10 | + | TSS region | transcription start site region 45829 | |
Cpgi15741 | 5 | 2764 | CpG island | CpG island 15741 | ||
Fgfr3 | 5 | 15344 | + | protein coding gene | fibroblast growth factor receptor 3 | |
Tssr45830 | 5 | 31 | + | TSS region | transcription start site region 45830 | |
Letm1 | 5 | 43029 | - | protein coding gene | leucine zipper-EF-hand containing transmembrane protein 1 | |
Del(5Letm1-D5Mit81)3Jcs | 5 | 16591859 | chromosomal deletion | deletion, Chr 5, John C. Schimenti 3 | ||
Del(5Letm1-Htt)1Jcs | 5 | 1172859 | chromosomal deletion | deletion, Chr 5, John C Schimenti | ||
Tssr50618 | 5 | 5 | - | TSS region | transcription start site region 50618 | |
Tssr45831 | 5 | 3 | + | TSS region | transcription start site region 45831 | |
Gm10059 | 5 | 170 | + | pseudogene | predicted pseudogene 10059 | |
Gm30708 | 5 | 311 | + | pseudogene | predicted gene, 30708 | |
Cpgi15742 | 5 | 1095 | CpG island | CpG island 15742 | ||
Tssr50619 | 5 | 40 | - | TSS region | transcription start site region 50619 | |
Tssr50620 | 5 | 16 | - | TSS region | transcription start site region 50620 | |
Tssr45832 | 5 | 6 | + | TSS region | transcription start site region 45832 | |
Cpgi15743 | 5 | 2477 | CpG island | CpG island 15743 | ||
Tssr45833 | 5 | 67 | + | TSS region | transcription start site region 45833 | |
Tssr45834 | 5 | 26 | + | TSS region | transcription start site region 45834 | |
Tssr45835 | 5 | 140 | + | TSS region | transcription start site region 45835 | |
Nsd2 | 5 | 77236 | + | protein coding gene | nuclear receptor binding SET domain protein 2 | |
Tssr45836 | 5 | 22 | + | TSS region | transcription start site region 45836 | |
Tssr45837 | 5 | 4 | + | TSS region | transcription start site region 45837 | |
Tssr45838 | 5 | 4 | + | TSS region | transcription start site region 45838 | |
Tssr45839 | 5 | 1 | + | TSS region | transcription start site region 45839 | |
D5Jcs45 | 5 | 151 | DNA segment | DNA segment, Chr 5, John C. Schimenti 45 | ||
Nelfa | 5 | 38079 | - | protein coding gene | negative elongation factor complex member A, Whsc2 | |
Mir7024 | 5 | 61 | - | miRNA gene | microRNA 7024 | |
Tssr50621 | 5 | 1 | - | TSS region | transcription start site region 50621 | |
Cpgi15744 | 5 | 1291 | CpG island | CpG island 15744 | ||
Tssr50622 | 5 | 66 | - | TSS region | transcription start site region 50622 | |
Tssr50623 | 5 | 52 | - | TSS region | transcription start site region 50623 | |
Gm42849 | 5 | 1806 | + | lincRNA gene | predicted gene 42849 | |
Gm42851 | 5 | 1410 | - | lincRNA gene | predicted gene 42851 | |
Tssr50624 | 5 | 4 | - | TSS region | transcription start site region 50624 | |
Gm30802 | 5 | 1057 | - | lncRNA gene | predicted gene, 30802 | |
Cpgi15745 | 5 | 1667 | CpG island | CpG island 15745 | ||
Tssr45840 | 5 | 10 | + | TSS region | transcription start site region 45840 | |
Gm1673 | 5 | 1576 | + | protein coding gene | predicted gene 1673 | |
Tssr45841 | 5 | 50 | + | TSS region | transcription start site region 45841 | |
Tssr45842 | 5 | 11 | + | TSS region | transcription start site region 45842 | |
Tssr45843 | 5 | 34 | + | TSS region | transcription start site region 45843 | |
Tssr45844 | 5 | 19 | + | TSS region | transcription start site region 45844 | |
Tssr45845 | 5 | 9 | + | TSS region | transcription start site region 45845 | |
Gm42847 | 5 | 2552 | - | unclassified gene | predicted gene 42847 | |
Cpgi15746 | 5 | 2669 | CpG island | CpG island 15746 | ||
Nat8l | 5 | 9932 | + | protein coding gene | N-acetyltransferase 8-like | |
Tssr45846 | 5 | 21 | + | TSS region | transcription start site region 45846 | |
Tssr45847 | 5 | 13 | + | TSS region | transcription start site region 45847 | |
Tssr45848 | 5 | 17 | + | TSS region | transcription start site region 45848 | |
Tssr45849 | 5 | 18 | + | TSS region | transcription start site region 45849 | |
Tssr45850 | 5 | 14 | + | TSS region | transcription start site region 45850 | |
Tssr50625 | 5 | 12 | - | TSS region | transcription start site region 50625 | |
Tssr45851 | 5 | 9 | + | TSS region | transcription start site region 45851 | |
Tssr45852 | 5 | 23 | + | TSS region | transcription start site region 45852 | |
Tssr45853 | 5 | 51 | + | TSS region | transcription start site region 45853 | |
Tssr45854 | 5 | 31 | + | TSS region | transcription start site region 45854 | |
Tssr45855 | 5 | 14 | + | TSS region | transcription start site region 45855 | |
Tssr45856 | 5 | 15 | + | TSS region | transcription start site region 45856 | |
Tssr45857 | 5 | 11 | + | TSS region | transcription start site region 45857 | |
Tssr1458 | 5 | 7 | + | TSS region | transcription start site region 1458 | |
Tssr50626 | 5 | 8 | - | TSS region | transcription start site region 50626 | |
Tssr1459 | 5 | 22 | + | TSS region | transcription start site region 1459 | |
Tssr1460 | 5 | 30 | + | TSS region | transcription start site region 1460 | |
Poln | 5 | 162269 | - | protein coding gene | DNA polymerase N | |
Gm19798 | 5 | 456 | - | pseudogene | predicted gene, 19798 | |
Gm43459 | 5 | 330 | + | pseudogene | predicted gene 43459 | |
Tssr50627 | 5 | 22 | - | TSS region | transcription start site region 50627 | |
Tssr50628 | 5 | 16 | - | TSS region | transcription start site region 50628 | |
4930557J02Rik | 5 | 16599 | + | antisense lncRNA gene | RIKEN cDNA 4930557J02 gene | |
D5Jcs46 | 5 | 149 | DNA segment | DNA segment, Chr 5, John C. Schimenti 46 | ||
Haus3 | 5 | 15528 | - | protein coding gene | HAUS augmin-like complex, subunit 3 | |
Tssr50629 | 5 | 4 | - | TSS region | transcription start site region 50629 | |
Gm25918 | 5 | 102 | + | snRNA gene | predicted gene, 25918 | |
Tssr50630 | 5 | 5 | - | TSS region | transcription start site region 50630 | |
Tssr50631 | 5 | 11 | - | TSS region | transcription start site region 50631 | |
Cpgi15747 | 5 | 777 | CpG island | CpG island 15747 | ||
Tssr50632 | 5 | 57 | - | TSS region | transcription start site region 50632 | |
Tssr50633 | 5 | 11 | - | TSS region | transcription start site region 50633 | |
Tssr45858 | 5 | 32 | + | TSS region | transcription start site region 45858 | |
Tssr50634 | 5 | 4 | - | TSS region | transcription start site region 50634 | |
Gm42846 | 5 | 1000 | + | antisense lncRNA gene | predicted gene 42846 | |
Mxd4 | 5 | 11130 | - | protein coding gene | Max dimerization protein 4 | |
Cpgi15748 | 5 | 1860 | CpG island | CpG island 15748 | ||
Tssr50635 | 5 | 13 | - | TSS region | transcription start site region 50635 | |
Tssr50636 | 5 | 9 | - | TSS region | transcription start site region 50636 | |
Tssr50637 | 5 | 20 | - | TSS region | transcription start site region 50637 | |
Tssr50638 | 5 | 15 | - | TSS region | transcription start site region 50638 | |
Tssr50639 | 5 | 25 | - | TSS region | transcription start site region 50639 | |
Tssr50640 | 5 | 79 | - | TSS region | transcription start site region 50640 | |
Tssr50641 | 5 | 26 | - | TSS region | transcription start site region 50641 | |
Tssr45859 | 5 | 62 | + | TSS region | transcription start site region 45859 | |
Zfyve28 | 5 | 93556 | - | protein coding gene | zinc finger, FYVE domain containing 28 | |
Tssr50642 | 5 | 14 | - | TSS region | transcription start site region 50642 | |
Tssr50643 | 5 | 41 | - | TSS region | transcription start site region 50643 | |
Tssr45860 | 5 | 3 | + | TSS region | transcription start site region 45860 | |
Tssr45861 | 5 | 14 | + | TSS region | transcription start site region 45861 | |
Gm15513 | 5 | 1992 | - | sense intronic lncRNA gene | predicted gene 15513 | |
Tssr50644 | 5 | 4 | - | TSS region | transcription start site region 50644 | |
Tssr50645 | 5 | 2 | - | TSS region | transcription start site region 50645 | |
Gm42848 | 5 | 4822 | + | antisense lncRNA gene | predicted gene 42848 | |
Tssr50646 | 5 | 27 | - | TSS region | transcription start site region 50646 | |
Tssr50647 | 5 | 22 | - | TSS region | transcription start site region 50647 | |
D5Jcs47 | 5 | 141 | DNA segment | DNA segment, Chr 5, John C. Schimenti 47 | ||
Tssr50648 | 5 | 27 | - | TSS region | transcription start site region 50648 | |
Tssr45862 | 5 | 12 | + | TSS region | transcription start site region 45862 | |
Tssr50649 | 5 | 14 | - | TSS region | transcription start site region 50649 | |
Tssr50650 | 5 | 14 | - | TSS region | transcription start site region 50650 | |
Tssr50651 | 5 | 63 | - | TSS region | transcription start site region 50651 | |
Tssr50652 | 5 | 22 | - | TSS region | transcription start site region 50652 | |
Tssr45863 | 5 | 7 | + | TSS region | transcription start site region 45863 | |
Cpgi15749 | 5 | 2163 | CpG island | CpG island 15749 | ||
Tssr50653 | 5 | 19 | - | TSS region | transcription start site region 50653 | |
Tssr50654 | 5 | 54 | - | TSS region | transcription start site region 50654 | |
Tssr50655 | 5 | 24 | - | TSS region | transcription start site region 50655 | |
Tssr50656 | 5 | 62 | - | TSS region | transcription start site region 50656 | |
Cfap99 | 5 | 38727 | + | protein coding gene | cilia and flagella associated protein 99 | |
Tssr45864 | 5 | 26 | + | TSS region | transcription start site region 45864 | |
Tssr45865 | 5 | 11 | + | TSS region | transcription start site region 45865 | |
Gm5553 | 5 | 1523 | - | pseudogene | predicted gene 5553 | |
Gm43105 | 5 | 458 | - | pseudogene | predicted gene 43105 | |
Gm43458 | 5 | 18318 | - | lincRNA gene | predicted gene 43458 | |
D5Jcs36 | 5 | 147 | DNA segment | DNA segment, Chr 5, John C. Schimenti 36 | ||
Cpgi15750 | 5 | 501 | CpG island | CpG island 15750 | ||
A830049F12Rik | 5 | 2058 | unclassified non-coding RNA gene | RIKEN cDNA A830049F12 gene | ||
Cpgi15751 | 5 | 1530 | CpG island | CpG island 15751 | ||
Tssr50657 | 5 | 27 | - | TSS region | transcription start site region 50657 | |
Tssr50658 | 5 | 54 | - | TSS region | transcription start site region 50658 | |
Rnf4 | 5 | 17195 | + | protein coding gene | ring finger protein 4 | |
Tssr45866 | 5 | 11 | + | TSS region | transcription start site region 45866 | |
Tssr45867 | 5 | 58 | + | TSS region | transcription start site region 45867 | |
Tssr50659 | 5 | 14 | - | TSS region | transcription start site region 50659 | |
Tssr50660 | 5 | 20 | - | TSS region | transcription start site region 50660 | |
Tssr45868 | 5 | 9 | + | TSS region | transcription start site region 45868 | |
Tssr45869 | 5 | 7 | + | TSS region | transcription start site region 45869 | |
Tssr45870 | 5 | 52 | + | TSS region | transcription start site region 45870 | |
Tssr45871 | 5 | 29 | + | TSS region | transcription start site region 45871 | |
Tssr45872 | 5 | 1 | + | TSS region | transcription start site region 45872 | |
Cpgi15752 | 5 | 1499 | CpG island | CpG island 15752 | ||
Tssr45873 | 5 | 11 | + | TSS region | transcription start site region 45873 | |
Tssr45874 | 5 | 61 | + | TSS region | transcription start site region 45874 | |
Fam193a | 5 | 116523 | + | protein coding gene | family with sequence homology 193, member A | |
Tssr45875 | 5 | 3 | + | TSS region | transcription start site region 45875 | |
Tssr45876 | 5 | 11 | + | TSS region | transcription start site region 45876 | |
Gm42559 | 5 | 3531 | + | unclassified gene | predicted gene 42559 | |
Gm26931 | 5 | 608 | - | pseudogene | predicted gene, 26931 | |
Gm43457 | 5 | 2408 | + | unclassified gene | predicted gene 43457 | |
Tssr50661 | 5 | 45 | - | TSS region | transcription start site region 50661 | |
Tnip2 | 5 | 17883 | - | protein coding gene | TNFAIP3 interacting protein 2 | |
Tssr50662 | 5 | 3 | - | TSS region | transcription start site region 50662 | |
Tssr50663 | 5 | 4 | - | TSS region | transcription start site region 50663 | |
D5Jcs81 | 5 | 160 | DNA segment | DNA segment, Chr 5, John C. Schimenti 81 | ||
Cpgi15753 | 5 | 892 | CpG island | CpG island 15753 | ||
Tssr50664 | 5 | 11 | - | TSS region | transcription start site region 50664 | |
Tssr50665 | 5 | 92 | - | TSS region | transcription start site region 50665 | |
Cpgi15754 | 5 | 490 | CpG island | CpG island 15754 | ||
Tssr45877 | 5 | 11 | + | TSS region | transcription start site region 45877 | |
Tssr45878 | 5 | 72 | + | TSS region | transcription start site region 45878 | |
Sh3bp2 | 5 | 37803 | + | protein coding gene | SH3-domain binding protein 2 | |
Tssr50666 | 5 | 5 | - | TSS region | transcription start site region 50666 | |
Tssr45879 | 5 | 3 | + | TSS region | transcription start site region 45879 | |
Gm22847 | 5 | 104 | + | snRNA gene | predicted gene, 22847 | |
Tssr45880 | 5 | 21 | + | TSS region | transcription start site region 45880 | |
Tssr45881 | 5 | 49 | + | TSS region | transcription start site region 45881 | |
Tssr45882 | 5 | 52 | + | TSS region | transcription start site region 45882 | |
Tssr45883 | 5 | 11 | + | TSS region | transcription start site region 45883 | |
Tssr45884 | 5 | 1 | + | TSS region | transcription start site region 45884 | |
Cpgi15755 | 5 | 840 | CpG island | CpG island 15755 | ||
Tssr45885 | 5 | 8 | + | TSS region | transcription start site region 45885 | |
Tssr45886 | 5 | 13 | + | TSS region | transcription start site region 45886 | |
Tssr45887 | 5 | 36 | + | TSS region | transcription start site region 45887 | |
D5Jcs82 | 5 | 165 | DNA segment | DNA segment, Chr 5, John C. Schimenti 82 | ||
Tssr45888 | 5 | 14 | + | TSS region | transcription start site region 45888 | |
Tssr45889 | 5 | 31 | + | TSS region | transcription start site region 45889 | |
Tssr45890 | 5 | 35 | + | TSS region | transcription start site region 45890 | |
Cpgi15756 | 5 | 1111 | CpG island | CpG island 15756 | ||
Tssr45891 | 5 | 43 | + | TSS region | transcription start site region 45891 | |
Add1 | 5 | 58591 | + | protein coding gene | adducin 1 (alpha) | |
Tssr45892 | 5 | 48 | + | TSS region | transcription start site region 45892 | |
Tssr45893 | 5 | 67 | + | TSS region | transcription start site region 45893 | |
Tssr45894 | 5 | 5 | + | TSS region | transcription start site region 45894 | |
Mir7036b | 5 | 62 | + | miRNA gene | microRNA 7036b |