Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:33440015-33640429

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi15734	5	33442788 to 33443617	829		CpG island	CpG island 15734
Tssr50603	5	33493404 to 33493408	4	-	TSS region	transcription start site region 50603
Tssr50604	5	33518970 to 33518981	11	-	TSS region	transcription start site region 50604
Tssr50605	5	33524171 to 33524182	11	-	TSS region	transcription start site region 50605
Cpgi15735	5	33534967 to 33535282	315		CpG island	CpG island 15735
Tssr50606	5	33535455 to 33535487	32	-	TSS region	transcription start site region 50606
Tssr50607	5	33535623 to 33535630	7	-	TSS region	transcription start site region 50607
Cpgi15736	5	33540015 to 33540429	414		CpG island	CpG island 15736
D5Jcs44	5	33566509 to 33566672	163		DNA segment	DNA segment, Chr 5, John C. Schimenti 44
Fam53a	5	33600347 to 33629635	29288	-	protein coding gene	family with sequence similarity 53, member A
Cpgi15737	5	33628830 to 33630375	1545		CpG island	CpG island 15737
Tssr50608	5	33629535 to 33629544	9	-	TSS region	transcription start site region 50608
Tssr50609	5	33629577 to 33629649	72	-	TSS region	transcription start site region 50609
Tssr45824	5	33629915 to 33629930	15	+	TSS region	transcription start site region 45824
Gm9903	5	33629925 to 33632092	2167	+	protein coding gene	predicted gene 9903
Tssr45825	5	33629949 to 33629964	15	+	TSS region	transcription start site region 45825
Gm40279	5	33632267 to 33633043	776	+	lncRNA gene	predicted gene, 40279
Slbp	5	33640055 to 33652574	12519	-	protein coding gene	stem-loop binding protein