Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:31815890-32136038

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Babam2 5 31697906 to 32084950 387044 + protein coding gene BRISC and BRCA1 A complex member 2
Tssr45736 5 31821525 to 31821545 20 + TSS region transcription start site region 45736
D5Mit228 5 31830314 to 31830531 217 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 228
Tssr45737 5 31849473 to 31849477 4 + TSS region transcription start site region 45737
Gm24436 5 31870046 to 31870347 301 + unclassified non-coding RNA gene predicted gene, 24436
Tssr45738 5 31873079 to 31873084 5 + TSS region transcription start site region 45738
Tssr45739 5 31876660 to 31876697 37 + TSS region transcription start site region 45739
Tssr45740 5 31877690 to 31877695 5 + TSS region transcription start site region 45740
Tssr45741 5 31912289 to 31912297 8 + TSS region transcription start site region 45741
Tssr45742 5 31912342 to 31912356 14 + TSS region transcription start site region 45742
Gm43811 5 31926697 to 31927391 694 + unclassified gene predicted gene 43811
9530049O05Rik 5 31957066 to 31957946 880 unclassified gene RIKEN cDNA 9530049O05 gene
Tssr50565 5 31961570 to 31961585 15 - TSS region transcription start site region 50565
Tssr50566 5 31967981 to 31967991 10 - TSS region transcription start site region 50566
Del(5D5Mit148-Qdpr)2Jcs 5 31975890 to 45450229 13474339 chromosomal deletion deletion, Chr 5, John C. Schimenti 2
D5Mit148 5 31975890 to 31976038 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 148
Tssr50567 5 31998869 to 31998893 24 - TSS region transcription start site region 50567
Tssr45743 5 32001365 to 32001390 25 + TSS region transcription start site region 45743
Gm17130 5 32005977 to 32010863 4886 - antisense lncRNA gene predicted gene 17130
Tssr50568 5 32031048 to 32031059 11 - TSS region transcription start site region 50568
Tssr50569 5 32031063 to 32031074 11 - TSS region transcription start site region 50569
Tssr45744 5 32055247 to 32055251 4 + TSS region transcription start site region 45744
Gm40277 5 32090420 to 32099125 8705 + lncRNA gene predicted gene, 40277
Gm36665 5 32119822 to 32123393 3571 + lncRNA gene predicted gene, 36665
Tssr50570 5 32122476 to 32122487 11 - TSS region transcription start site region 50570
Tssr50571 5 32122513 to 32122522 9 - TSS region transcription start site region 50571
Tssr50572 5 32122526 to 32122531 5 - TSS region transcription start site region 50572
D5Dcr41 5 32129893 to 32129988 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 41
Gm10463 5 32130283 to 32133171 2888 - unclassified gene predicted gene 10463
Cpgi15718 5 32132906 to 32134028 1122 CpG island CpG island 15718
Tssr50573 5 32132950 to 32132965 15 - TSS region transcription start site region 50573
Tssr50574 5 32133012 to 32133022 10 - TSS region transcription start site region 50574
Tssr50575 5 32133045 to 32133053 8 - TSS region transcription start site region 50575
Tssr50576 5 32133116 to 32133136 20 - TSS region transcription start site region 50576
Tssr45745 5 32133234 to 32133257 23 + TSS region transcription start site region 45745
Tssr45746 5 32133539 to 32133564 25 + TSS region transcription start site region 45746
Tssr45747 5 32133690 to 32133708 18 + TSS region transcription start site region 45747
Tssr45748 5 32133805 to 32133817 12 + TSS region transcription start site region 45748
Tssr45749 5 32133825 to 32133838 13 + TSS region transcription start site region 45749
Tssr50577 5 32134866 to 32134884 18 - TSS region transcription start site region 50577
Cpgi15719 5 32134964 to 32137165 2201 CpG island CpG island 15719
Tssr50578 5 32135197 to 32135220 23 - TSS region transcription start site region 50578
Tssr50579 5 32135624 to 32135642 18 - TSS region transcription start site region 50579
Tssr45750 5 32135839 to 32135857 18 + TSS region transcription start site region 45750
Tssr45751 5 32136022 to 32136033 11 + TSS region transcription start site region 45751
Lgq6 5 100630065 to 31975890 -68654175 QTL late growth QTL 6
W10q16 5 100630065 to 31975890 -68654175 QTL weight 10 weeks QTL 16