Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:31736697-32117391

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Babam2 5 31697906 to 32084950 387044 + protein coding gene BRISC and BRCA1 A complex member 2
D5Mit66 5 31746145 to 31746358 213 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 66
Tssr45734 5 31746604 to 31746608 4 + TSS region transcription start site region 45734
Tssr50564 5 31766903 to 31766906 3 - TSS region transcription start site region 50564
Tssr45735 5 31814315 to 31814340 25 + TSS region transcription start site region 45735
Tssr45736 5 31821525 to 31821545 20 + TSS region transcription start site region 45736
D5Mit228 5 31830314 to 31830531 217 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 228
Tssr45737 5 31849473 to 31849477 4 + TSS region transcription start site region 45737
Gm24436 5 31870046 to 31870347 301 + unclassified non-coding RNA gene predicted gene, 24436
Tssr45738 5 31873079 to 31873084 5 + TSS region transcription start site region 45738
Tssr45739 5 31876660 to 31876697 37 + TSS region transcription start site region 45739
Tssr45740 5 31877690 to 31877695 5 + TSS region transcription start site region 45740
Tssr45741 5 31912289 to 31912297 8 + TSS region transcription start site region 45741
Tssr45742 5 31912342 to 31912356 14 + TSS region transcription start site region 45742
Gm43811 5 31926697 to 31927391 694 + unclassified gene predicted gene 43811
9530049O05Rik 5 31957066 to 31957946 880 unclassified gene RIKEN cDNA 9530049O05 gene
Tssr50565 5 31961570 to 31961585 15 - TSS region transcription start site region 50565
Tssr50566 5 31967981 to 31967991 10 - TSS region transcription start site region 50566
D5Mit148 5 31975890 to 31976038 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 148
Del(5D5Mit148-Qdpr)2Jcs 5 31975890 to 45450229 13474339 chromosomal deletion deletion, Chr 5, John C. Schimenti 2
Tssr50567 5 31998869 to 31998893 24 - TSS region transcription start site region 50567
Tssr45743 5 32001365 to 32001390 25 + TSS region transcription start site region 45743
Gm17130 5 32005977 to 32010863 4886 - antisense lncRNA gene predicted gene 17130
Tssr50568 5 32031048 to 32031059 11 - TSS region transcription start site region 50568
Tssr50569 5 32031063 to 32031074 11 - TSS region transcription start site region 50569
Tssr45744 5 32055247 to 32055251 4 + TSS region transcription start site region 45744
Gm40277 5 32090420 to 32099125 8705 + lncRNA gene predicted gene, 40277
W10q16 5 100630065 to 31975890 -68654175 QTL weight 10 weeks QTL 16
Lgq6 5 100630065 to 31975890 -68654175 QTL late growth QTL 6