Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:31531976-31661994

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc4a1ap 5 31526995 to 31556932 29937 + protein coding gene solute carrier family 4 (anion exchanger), member 1, adaptor protein
Gm43660 5 31560812 to 31569072 8260 - lincRNA gene predicted gene 43660
Tssr45716 5 31562713 to 31562722 9 + TSS region transcription start site region 45716
E130118H10Rik 5 31567222 to 31573092 5870 unclassified non-coding RNA gene RIKEN cDNA E130118H10 gene
Tssr45717 5 31569374 to 31569387 13 + TSS region transcription start site region 45717
AI839979 5 31569595 to 31571397 1802 - lincRNA gene expressed sequence AI839979
Tssr50553 5 31571349 to 31571358 9 - TSS region transcription start site region 50553
Tssr50554 5 31571405 to 31571429 24 - TSS region transcription start site region 50554
Tssr50555 5 31573437 to 31573444 7 - TSS region transcription start site region 50555
Tssr50556 5 31576614 to 31576631 17 - TSS region transcription start site region 50556
2900076G11Rik 5 31581079 to 31581709 630 + unclassified gene RIKEN cDNA 2900076G11 gene
Tssr45718 5 31582228 to 31582238 10 + TSS region transcription start site region 45718
Gm38424 5 31595752 to 31663432 67680 + lncRNA gene predicted gene, 38424
Cpgi15715 5 31596615 to 31597035 420 CpG island CpG island 15715
Tssr50557 5 31596717 to 31596738 21 - TSS region transcription start site region 50557
Tssr45719 5 31596865 to 31596939 74 + TSS region transcription start site region 45719
Gm43809 5 31596938 to 31701972 105034 + unclassified non-coding RNA gene predicted gene 43809
Tssr45720 5 31596976 to 31596994 18 + TSS region transcription start site region 45720
Tssr45721 5 31602610 to 31602655 45 + TSS region transcription start site region 45721
Cpgi15716 5 31613834 to 31614269 435 CpG island CpG island 15716
Tssr45722 5 31613941 to 31613944 3 + TSS region transcription start site region 45722
Tssr45723 5 31613949 to 31613979 30 + TSS region transcription start site region 45723
Mrpl33 5 31613951 to 31622644 8693 + protein coding gene mitochondrial ribosomal protein L33
Tssr45724 5 31613990 to 31614001 11 + TSS region transcription start site region 45724
Tssr45725 5 31614020 to 31614030 10 + TSS region transcription start site region 45725
Tssr1450 5 31614877 to 31614913 36 + TSS region transcription start site region 1450
Rbks 5 31624439 to 31697627 73188 - protein coding gene ribokinase
D5Mit229 5 31626498 to 31626643 145 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 229
Tssr50558 5 31647200 to 31647229 29 - TSS region transcription start site region 50558