Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:31482105-31572112

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D5Mit350 5 31482042 to 31482156 114 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 350
Tssr45710 5 31485858 to 31485865 7 + TSS region transcription start site region 45710
4930548H24Rik 5 31485859 to 31488262 2403 + protein coding gene RIKEN cDNA 4930548H24 gene
Tssr45711 5 31485881 to 31485891 10 + TSS region transcription start site region 45711
4930566F21Rik 5 31486629 to 31495179 8550 - antisense lncRNA gene RIKEN cDNA 4930566F21 gene
Tssr50549 5 31489106 to 31489154 48 - TSS region transcription start site region 50549
Cpgi15713 5 31494474 to 31495354 880 CpG island CpG island 15713
Tssr45712 5 31494736 to 31494778 42 + TSS region transcription start site region 45712
Gpn1 5 31494752 to 31511631 16879 + protein coding gene GPN-loop GTPase 1
Tssr1449 5 31494799 to 31494807 8 + TSS region transcription start site region 1449
Supt7l 5 31514569 to 31526762 12193 - protein coding gene suppressor of Ty 7-like
Tssr50550 5 31520709 to 31520739 30 - TSS region transcription start site region 50550
Tssr50551 5 31526666 to 31526684 18 - TSS region transcription start site region 50551
Tssr50552 5 31526693 to 31526747 54 - TSS region transcription start site region 50552
Cpgi15714 5 31526797 to 31527660 863 CpG island CpG island 15714
Tssr45713 5 31526989 to 31527034 45 + TSS region transcription start site region 45713
Slc4a1ap 5 31526995 to 31556932 29937 + protein coding gene solute carrier family 4 (anion exchanger), member 1, adaptor protein
Tssr45714 5 31527064 to 31527075 11 + TSS region transcription start site region 45714
Tssr45715 5 31527105 to 31527112 7 + TSS region transcription start site region 45715
Gm43660 5 31560812 to 31569072 8260 - lincRNA gene predicted gene 43660
Tssr45716 5 31562713 to 31562722 9 + TSS region transcription start site region 45716
E130118H10Rik 5 31567222 to 31573092 5870 unclassified non-coding RNA gene RIKEN cDNA E130118H10 gene
Tssr45717 5 31569374 to 31569387 13 + TSS region transcription start site region 45717
AI839979 5 31569595 to 31571397 1802 - lincRNA gene expressed sequence AI839979
Tssr50553 5 31571349 to 31571358 9 - TSS region transcription start site region 50553
Tssr50554 5 31571405 to 31571429 24 - TSS region transcription start site region 50554