MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:31252794-31342797

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Krtcap3	5	31251706 to 31253197	1491	+	protein coding gene	keratinocyte associated protein 3
Ift172	5	31253279 to 31291114	37835	-	protein coding gene	intraflagellar transport 172
Tssr50543	5	31254565 to 31254626	61	-	TSS region	transcription start site region 50543
Tssr50544	5	31254685 to 31254722	37	-	TSS region	transcription start site region 50544
Cpgi15710	5	31290824 to 31291482	658		CpG island	CpG island 15710
Tssr50545	5	31291013 to 31291024	11	-	TSS region	transcription start site region 50545
Tssr50546	5	31291026 to 31291143	117	-	TSS region	transcription start site region 50546
Tssr45700	5	31291228 to 31291242	14	+	TSS region	transcription start site region 45700
Tssr45701	5	31291352 to 31291365	13	+	TSS region	transcription start site region 45701
Fndc4	5	31292245 to 31295956	3711	-	protein coding gene	fibronectin type III domain containing 4
Cpgi15711	5	31295253 to 31296168	915		CpG island	CpG island 15711
Tssr50547	5	31295673 to 31295697	24	-	TSS region	transcription start site region 50547
Tssr50548	5	31295862 to 31295942	80	-	TSS region	transcription start site region 50548
Gckr	5	31297443 to 31327314	29871	+	protein coding gene	glucokinase regulatory protein
Tssr45702	5	31297551 to 31297586	35	+	TSS region	transcription start site region 45702
Tssr45703	5	31297597 to 31297602	5	+	TSS region	transcription start site region 45703
Tssr45704	5	31297603 to 31297616	13	+	TSS region	transcription start site region 45704
Tssr45705	5	31297794 to 31297797	3	+	TSS region	transcription start site region 45705