Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
D5Jcs307 | 5 | 248 | DNA segment | DNA segment, Chr 5, John C. Schimenti 307 | ||
Cpgi15708 | 5 | 1260 | CpG island | CpG island 15708 | ||
Gm9970 | 5 | 557 | - | protein coding gene | predicted gene 9970 | |
Nrbp1 | 5 | 10683 | + | protein coding gene | nuclear receptor binding protein 1 | |
Tssr45694 | 5 | 55 | + | TSS region | transcription start site region 45694 | |
Tssr45695 | 5 | 11 | + | TSS region | transcription start site region 45695 | |
Tssr50542 | 5 | 28 | - | TSS region | transcription start site region 50542 | |
Tssr45696 | 5 | 4 | + | TSS region | transcription start site region 45696 | |
Gm46909 | 5 | 1327 | - | lncRNA gene | predicted gene, 46909 | |
Cpgi15709 | 5 | 1054 | CpG island | CpG island 15709 | ||
Tssr45697 | 5 | 50 | + | TSS region | transcription start site region 45697 | |
Krtcap3 | 5 | 1491 | + | protein coding gene | keratinocyte associated protein 3 | |
Tssr45698 | 5 | 15 | + | TSS region | transcription start site region 45698 | |
Tssr45699 | 5 | 11 | + | TSS region | transcription start site region 45699 | |
Ift172 | 5 | 37835 | - | protein coding gene | intraflagellar transport 172 | |
Tssr50543 | 5 | 61 | - | TSS region | transcription start site region 50543 | |
Tssr50544 | 5 | 37 | - | TSS region | transcription start site region 50544 | |
Cpgi15710 | 5 | 658 | CpG island | CpG island 15710 | ||
Tssr50545 | 5 | 11 | - | TSS region | transcription start site region 50545 | |
Tssr50546 | 5 | 117 | - | TSS region | transcription start site region 50546 | |
Tssr45700 | 5 | 14 | + | TSS region | transcription start site region 45700 | |
Tssr45701 | 5 | 13 | + | TSS region | transcription start site region 45701 | |
Fndc4 | 5 | 3711 | - | protein coding gene | fibronectin type III domain containing 4 | |
Cpgi15711 | 5 | 915 | CpG island | CpG island 15711 | ||
Tssr50547 | 5 | 24 | - | TSS region | transcription start site region 50547 | |
Tssr50548 | 5 | 80 | - | TSS region | transcription start site region 50548 | |
Gckr | 5 | 29871 | + | protein coding gene | glucokinase regulatory protein | |
Tssr45702 | 5 | 35 | + | TSS region | transcription start site region 45702 | |
Tssr45703 | 5 | 5 | + | TSS region | transcription start site region 45703 | |
Tssr45704 | 5 | 13 | + | TSS region | transcription start site region 45704 | |
Tssr45705 | 5 | 3 | + | TSS region | transcription start site region 45705 | |
Gm19457 | 5 | 428 | - | pseudogene | predicted gene, 19457 | |
Gm40275 | 5 | 1694 | - | protein coding gene | predicted gene, 40275 | |
Gm45944 | 5 | 2444 | - | protein coding gene | predicted gene, 45944 | |
Gm36182 | 5 | 3403 | - | lncRNA gene | predicted gene, 36182 | |
Gm43659 | 5 | 627 | + | pseudogene | predicted gene 43659 | |
4930478M09Rik | 5 | 1112 | - | unclassified gene | RIKEN cDNA 4930478M09 gene | |
Cpgi15712 | 5 | 180 | CpG island | CpG island 15712 | ||
Tssr45706 | 5 | 25 | + | TSS region | transcription start site region 45706 | |
Zfp512 | 5 | 29323 | + | protein coding gene | zinc finger protein 512 | |
Tssr45707 | 5 | 45 | + | TSS region | transcription start site region 45707 | |
Tssr45708 | 5 | 9 | + | TSS region | transcription start site region 45708 | |
Tssr45709 | 5 | 5 | + | TSS region | transcription start site region 45709 | |
Gm43059 | 5 | 1387 | + | unclassified gene | predicted gene 43059 | |
D5Mit350 | 5 | 114 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 350 | ||
Tssr45710 | 5 | 7 | + | TSS region | transcription start site region 45710 | |
4930548H24Rik | 5 | 2403 | + | protein coding gene | RIKEN cDNA 4930548H24 gene | |
Tssr45711 | 5 | 10 | + | TSS region | transcription start site region 45711 | |
4930566F21Rik | 5 | 8550 | - | antisense lncRNA gene | RIKEN cDNA 4930566F21 gene | |
Tssr50549 | 5 | 48 | - | TSS region | transcription start site region 50549 | |
Cpgi15713 | 5 | 880 | CpG island | CpG island 15713 | ||
Tssr45712 | 5 | 42 | + | TSS region | transcription start site region 45712 | |
Gpn1 | 5 | 16879 | + | protein coding gene | GPN-loop GTPase 1 | |
Tssr1449 | 5 | 8 | + | TSS region | transcription start site region 1449 | |
Supt7l | 5 | 12193 | - | protein coding gene | suppressor of Ty 7-like | |
Tssr50550 | 5 | 30 | - | TSS region | transcription start site region 50550 | |
Tssr50551 | 5 | 18 | - | TSS region | transcription start site region 50551 | |
Tssr50552 | 5 | 54 | - | TSS region | transcription start site region 50552 | |
Cpgi15714 | 5 | 863 | CpG island | CpG island 15714 | ||
Tssr45713 | 5 | 45 | + | TSS region | transcription start site region 45713 | |
Slc4a1ap | 5 | 29937 | + | protein coding gene | solute carrier family 4 (anion exchanger), member 1, adaptor protein | |
Tssr45714 | 5 | 11 | + | TSS region | transcription start site region 45714 | |
Tssr45715 | 5 | 7 | + | TSS region | transcription start site region 45715 | |
Gm43660 | 5 | 8260 | - | lincRNA gene | predicted gene 43660 | |
Tssr45716 | 5 | 9 | + | TSS region | transcription start site region 45716 | |
E130118H10Rik | 5 | 5870 | unclassified non-coding RNA gene | RIKEN cDNA E130118H10 gene | ||
Tssr45717 | 5 | 13 | + | TSS region | transcription start site region 45717 | |
AI839979 | 5 | 1802 | - | lincRNA gene | expressed sequence AI839979 | |
Tssr50553 | 5 | 9 | - | TSS region | transcription start site region 50553 | |
Tssr50554 | 5 | 24 | - | TSS region | transcription start site region 50554 | |
Tssr50555 | 5 | 7 | - | TSS region | transcription start site region 50555 | |
Tssr50556 | 5 | 17 | - | TSS region | transcription start site region 50556 | |
2900076G11Rik | 5 | 630 | + | unclassified gene | RIKEN cDNA 2900076G11 gene | |
Tssr45718 | 5 | 10 | + | TSS region | transcription start site region 45718 | |
Gm38424 | 5 | 67680 | + | lncRNA gene | predicted gene, 38424 | |
Cpgi15715 | 5 | 420 | CpG island | CpG island 15715 | ||
Tssr50557 | 5 | 21 | - | TSS region | transcription start site region 50557 | |
Tssr45719 | 5 | 74 | + | TSS region | transcription start site region 45719 | |
Gm43809 | 5 | 105034 | + | unclassified non-coding RNA gene | predicted gene 43809 | |
Tssr45720 | 5 | 18 | + | TSS region | transcription start site region 45720 | |
Tssr45721 | 5 | 45 | + | TSS region | transcription start site region 45721 | |
Cpgi15716 | 5 | 435 | CpG island | CpG island 15716 | ||
Tssr45722 | 5 | 3 | + | TSS region | transcription start site region 45722 | |
Tssr45723 | 5 | 30 | + | TSS region | transcription start site region 45723 | |
Mrpl33 | 5 | 8693 | + | protein coding gene | mitochondrial ribosomal protein L33 | |
Tssr45724 | 5 | 11 | + | TSS region | transcription start site region 45724 | |
Tssr45725 | 5 | 10 | + | TSS region | transcription start site region 45725 | |
Tssr1450 | 5 | 36 | + | TSS region | transcription start site region 1450 | |
Rbks | 5 | 73188 | - | protein coding gene | ribokinase | |
D5Mit229 | 5 | 145 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 229 | ||
Tssr50558 | 5 | 29 | - | TSS region | transcription start site region 50558 | |
Mir3473e | 5 | 109 | - | miRNA gene | microRNA 3473e | |
Cpgi15717 | 5 | 1246 | CpG island | CpG island 15717 | ||
Tssr50559 | 5 | 34 | - | TSS region | transcription start site region 50559 | |
Tssr45726 | 5 | 44 | + | TSS region | transcription start site region 45726 | |
Babam2 | 5 | 387044 | + | protein coding gene | BRISC and BRCA1 A complex member 2 | |
Tssr45727 | 5 | 82 | + | TSS region | transcription start site region 45727 | |
Tssr45728 | 5 | 17 | + | TSS region | transcription start site region 45728 | |
Tssr50560 | 5 | 11 | - | TSS region | transcription start site region 50560 | |
Tssr50561 | 5 | 10 | - | TSS region | transcription start site region 50561 | |
Tssr50562 | 5 | 15 | - | TSS region | transcription start site region 50562 | |
Tssr45729 | 5 | 21 | + | TSS region | transcription start site region 45729 | |
Tssr45730 | 5 | 27 | + | TSS region | transcription start site region 45730 | |
Tssr45731 | 5 | 45 | + | TSS region | transcription start site region 45731 | |
Tssr50563 | 5 | 35 | - | TSS region | transcription start site region 50563 | |
Gm43810 | 5 | 231 | + | unclassified gene | predicted gene 43810 | |
Tssr1451 | 5 | 34 | - | TSS region | transcription start site region 1451 | |
Tssr45732 | 5 | 50 | + | TSS region | transcription start site region 45732 | |
Tssr45733 | 5 | 13 | + | TSS region | transcription start site region 45733 | |
D5Mit66 | 5 | 213 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 66 | ||
Tssr45734 | 5 | 4 | + | TSS region | transcription start site region 45734 | |
Tssr50564 | 5 | 3 | - | TSS region | transcription start site region 50564 | |
Tssr45735 | 5 | 25 | + | TSS region | transcription start site region 45735 | |
Tssr45736 | 5 | 20 | + | TSS region | transcription start site region 45736 | |
D5Mit228 | 5 | 217 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 228 | ||
Tssr45737 | 5 | 4 | + | TSS region | transcription start site region 45737 | |
Gm24436 | 5 | 301 | + | unclassified non-coding RNA gene | predicted gene, 24436 | |
Tssr45738 | 5 | 5 | + | TSS region | transcription start site region 45738 | |
Tssr45739 | 5 | 37 | + | TSS region | transcription start site region 45739 | |
Tssr45740 | 5 | 5 | + | TSS region | transcription start site region 45740 | |
Tssr45741 | 5 | 8 | + | TSS region | transcription start site region 45741 | |
Tssr45742 | 5 | 14 | + | TSS region | transcription start site region 45742 | |
Gm43811 | 5 | 694 | + | unclassified gene | predicted gene 43811 | |
9530049O05Rik | 5 | 880 | unclassified gene | RIKEN cDNA 9530049O05 gene | ||
Tssr50565 | 5 | 15 | - | TSS region | transcription start site region 50565 | |
Tssr50566 | 5 | 10 | - | TSS region | transcription start site region 50566 | |
Del(5D5Mit148-Qdpr)2Jcs | 5 | 13474339 | chromosomal deletion | deletion, Chr 5, John C. Schimenti 2 | ||
D5Mit148 | 5 | 148 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 148 | ||
W10q16 | 5 | -68654175 | QTL | weight 10 weeks QTL 16 | ||
Lgq6 | 5 | -68654175 | QTL | late growth QTL 6 |