MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:31134739-31189911

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trim54	5	31116712 to 31137630	20918	+	protein coding gene	tripartite motif-containing 54
Gm15469	5	31135753 to 31137344	1591	-	antisense lncRNA gene	predicted gene 15469
Cpgi15700	5	31136078 to 31136282	204		CpG island	CpG island 15700
Cpgi15701	5	31136775 to 31139017	2242		CpG island	CpG island 15701
Ucn	5	31138063 to 31138829	766	-	protein coding gene	urocortin
Tssr50528	5	31138875 to 31138887	12	-	TSS region	transcription start site region 50528
Mpv17	5	31140663 to 31154251	13588	-	protein coding gene	MpV17 mitochondrial inner membrane protein
Gm29609	5	31144739 to 31179911	35172	-	protein coding gene	predicted gene 29609
Cpgi15702	5	31154101 to 31154475	374		CpG island	CpG island 15702
Tssr50529	5	31154205 to 31154253	48	-	TSS region	transcription start site region 50529
Tssr45684	5	31154254 to 31154280	26	+	TSS region	transcription start site region 45684
Gtf3c2	5	31156006 to 31180144	24138	-	protein coding gene	general transcription factor IIIC, polypeptide 2, beta
Tssr50530	5	31174017 to 31174030	13	-	TSS region	transcription start site region 50530
Cpgi15703	5	31179294 to 31180511	1217		CpG island	CpG island 15703
Tssr50531	5	31179901 to 31179942	41	-	TSS region	transcription start site region 50531
Tssr50532	5	31180110 to 31180158	48	-	TSS region	transcription start site region 50532
Tssr45685	5	31180182 to 31180210	28	+	TSS region	transcription start site region 45685
Eif2b4	5	31187558 to 31193139	5581	-	protein coding gene	eukaryotic translation initiation factor 2B, subunit 4 delta