Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:31085753-31187344

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc30a3 5 31086106 to 31108237 22131 - protein coding gene solute carrier family 30 (zinc transporter), member 3
Cpgi15698 5 31092042 to 31093719 1677 CpG island CpG island 15698
Tssr50525 5 31093473 to 31093499 26 - TSS region transcription start site region 50525
Tssr50526 5 31093500 to 31093526 26 - TSS region transcription start site region 50526
Cpgi15699 5 31094031 to 31095729 1698 CpG island CpG island 15699
Gm9924 5 31094984 to 31097294 2310 + unclassified gene predicted gene 9924
Tssr50527 5 31108225 to 31108237 12 - TSS region transcription start site region 50527
Dnajc5g 5 31108291 to 31112526 4235 + protein coding gene DnaJ heat shock protein family (Hsp40) member C5 gamma
Tssr45677 5 31108307 to 31108341 34 + TSS region transcription start site region 45677
Tssr45678 5 31116568 to 31116581 13 + TSS region transcription start site region 45678
Tssr45679 5 31116582 to 31116587 5 + TSS region transcription start site region 45679
Tssr45680 5 31116602 to 31116618 16 + TSS region transcription start site region 45680
Tssr45681 5 31116681 to 31116690 9 + TSS region transcription start site region 45681
Tssr45682 5 31116702 to 31116713 11 + TSS region transcription start site region 45682
Trim54 5 31116712 to 31137630 20918 + protein coding gene tripartite motif-containing 54
Tssr45683 5 31116722 to 31116727 5 + TSS region transcription start site region 45683
Gm40273 5 31118410 to 31119423 1013 - lncRNA gene predicted gene, 40273
Gm15469 5 31135753 to 31137344 1591 - antisense lncRNA gene predicted gene 15469
Cpgi15700 5 31136078 to 31136282 204 CpG island CpG island 15700
Cpgi15701 5 31136775 to 31139017 2242 CpG island CpG island 15701
Ucn 5 31138063 to 31138829 766 - protein coding gene urocortin
Tssr50528 5 31138875 to 31138887 12 - TSS region transcription start site region 50528
Mpv17 5 31140663 to 31154251 13588 - protein coding gene MpV17 mitochondrial inner membrane protein
Gm29609 5 31144739 to 31179911 35172 - protein coding gene predicted gene 29609
Cpgi15702 5 31154101 to 31154475 374 CpG island CpG island 15702
Tssr50529 5 31154205 to 31154253 48 - TSS region transcription start site region 50529
Tssr45684 5 31154254 to 31154280 26 + TSS region transcription start site region 45684
Gtf3c2 5 31156006 to 31180144 24138 - protein coding gene general transcription factor IIIC, polypeptide 2, beta
Tssr50530 5 31174017 to 31174030 13 - TSS region transcription start site region 50530
Cpgi15703 5 31179294 to 31180511 1217 CpG island CpG island 15703
Tssr50531 5 31179901 to 31179942 41 - TSS region transcription start site region 50531
Tssr50532 5 31180110 to 31180158 48 - TSS region transcription start site region 50532
Tssr45685 5 31180182 to 31180210 28 + TSS region transcription start site region 45685