MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:31083307-31133341

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38601	5	31080433 to 31083851	3418	-	lncRNA gene	predicted gene, 38601
Slc30a3	5	31086106 to 31108237	22131	-	protein coding gene	solute carrier family 30 (zinc transporter), member 3
Cpgi15698	5	31092042 to 31093719	1677		CpG island	CpG island 15698
Tssr50525	5	31093473 to 31093499	26	-	TSS region	transcription start site region 50525
Tssr50526	5	31093500 to 31093526	26	-	TSS region	transcription start site region 50526
Cpgi15699	5	31094031 to 31095729	1698		CpG island	CpG island 15699
Gm9924	5	31094984 to 31097294	2310	+	unclassified gene	predicted gene 9924
Tssr50527	5	31108225 to 31108237	12	-	TSS region	transcription start site region 50527
Dnajc5g	5	31108291 to 31112526	4235	+	protein coding gene	DnaJ heat shock protein family (Hsp40) member C5 gamma
Tssr45677	5	31108307 to 31108341	34	+	TSS region	transcription start site region 45677
Tssr45678	5	31116568 to 31116581	13	+	TSS region	transcription start site region 45678
Tssr45679	5	31116582 to 31116587	5	+	TSS region	transcription start site region 45679
Tssr45680	5	31116602 to 31116618	16	+	TSS region	transcription start site region 45680
Tssr45681	5	31116681 to 31116690	9	+	TSS region	transcription start site region 45681
Tssr45682	5	31116702 to 31116713	11	+	TSS region	transcription start site region 45682
Trim54	5	31116712 to 31137630	20918	+	protein coding gene	tripartite motif-containing 54
Tssr45683	5	31116722 to 31116727	5	+	TSS region	transcription start site region 45683
Gm40273	5	31118410 to 31119423	1013	-	lncRNA gene	predicted gene, 40273