Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:30921372-31001386

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15691 5 30920680 to 30922084 1404 CpG island CpG island 15691
Khk 5 30921436 to 30931248 9812 + protein coding gene ketohexokinase
Tssr45648 5 30921524 to 30921550 26 + TSS region transcription start site region 45648
Tssr45649 5 30921567 to 30921583 16 + TSS region transcription start site region 45649
Tssr45650 5 30921825 to 30921866 41 + TSS region transcription start site region 45650
Tssr45651 5 30921867 to 30921896 29 + TSS region transcription start site region 45651
Cgref1 5 30933143 to 30945480 12337 - protein coding gene cell growth regulator with EF hand domain 1
Tssr50505 5 30933872 to 30933882 10 - TSS region transcription start site region 50505
D5Jcs305 5 30943423 to 30943579 156 DNA segment DNA segment, Chr 5, John C. Schimenti 305
Cpgi15692 5 30945135 to 30945753 618 CpG island CpG island 15692
Tssr50506 5 30945393 to 30945455 62 - TSS region transcription start site region 50506
Tssr1446 5 30945475 to 30945484 9 - TSS region transcription start site region 1446
Tssr50507 5 30945506 to 30945587 81 - TSS region transcription start site region 50507
Tssr50508 5 30945596 to 30945622 26 - TSS region transcription start site region 50508
Tssr50509 5 30945654 to 30945663 9 - TSS region transcription start site region 50509
Tssr50510 5 30945671 to 30945676 5 - TSS region transcription start site region 50510
Cpgi15693 5 30949748 to 30950206 458 CpG island CpG island 15693
Tssr50511 5 30949921 to 30949941 20 - TSS region transcription start site region 50511
Tssr45652 5 30950046 to 30950133 87 + TSS region transcription start site region 45652
Abhd1 5 30950066 to 30955091 5025 + protein coding gene abhydrolase domain containing 1
Tssr45653 5 30950135 to 30950147 12 + TSS region transcription start site region 45653
Preb 5 30951667 to 30960356 8689 - protein coding gene prolactin regulatory element binding
Tssr50512 5 30957977 to 30958000 23 - TSS region transcription start site region 50512
Cpgi15694 5 30959682 to 30960687 1005 CpG island CpG island 15694
Tssr50513 5 30960170 to 30960182 12 - TSS region transcription start site region 50513
Tssr50514 5 30960198 to 30960209 11 - TSS region transcription start site region 50514
Tssr50515 5 30960217 to 30960228 11 - TSS region transcription start site region 50515
Tssr1447 5 30960233 to 30960236 3 - TSS region transcription start site region 1447
Tssr50516 5 30960236 to 30960320 84 - TSS region transcription start site region 50516
Tssr50517 5 30960326 to 30960339 13 - TSS region transcription start site region 50517
Tssr1448 5 30960520 to 30960531 11 + TSS region transcription start site region 1448
Tssr50518 5 30961372 to 30961386 14 - TSS region transcription start site region 50518
Tssr45654 5 30968604 to 30968615 11 + TSS region transcription start site region 45654
Tssr45655 5 30968637 to 30968646 9 + TSS region transcription start site region 45655
Tssr45656 5 30968655 to 30968667 12 + TSS region transcription start site region 45656
Tcf23 5 30968662 to 30977018 8356 + protein coding gene transcription factor 23
Tssr45657 5 30969770 to 30969787 17 + TSS region transcription start site region 45657
Cpgi15695 5 30970026 to 30970396 370 CpG island CpG island 15695